K35536

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35536

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35536

Determination of introduced cDNA(s)

  • J033093B13 - Rice Full-length cDNAs - Original: J033093B13

    full reading [+] show sequence

    Nucleotide sequence: J033093B13 - full reading
    GAGCCTTCCA GCCAAACTGA AGTCACGACT CGCGACATCT GAAGTTGACA 
    CACCTCCAAC CATTACTTTC TGTTCCAGTG TTGCACACAC CTCCGGCCAT
    TTGGGCGTCA TGAAGCAAAC CGTCGTCCTG TACCCCGGCG GCGGCGTCGG
    CCACGTCGTC CCCATGCTGG AGCTCGCCAA GGTCTTCGTC AAGCACGGGC
    ACGACGTCAC CATGGTGCTG CTGGAGCCGC CCTTCAAGTC GTCCGACTCC
    GGCGCCCTCG CCGTCGAGCG CCTCGTCGCC TCCAACCCTT CCGTCTCCTT
    CCACGTCCTC CCGCCACTCC CCGCCCCCGA CTTCGCCAGC TTCGGCAAGC
    ACCCGTTCCT CCTCGTCATC CAGCTCCTGC GCCAGTACAA CGAGCGGCTC
    GAGAGCTTCC TCCTCTCCAT CCCTCGACAG CGCCTGCACT CCCTCGTCAT
    CGACATGTTC TGCGTCGACG CCATCGACGT GTGCGCAAAG CTCGGCGTGC
    CGGTGTACAC GTTCTTCGCC TCGGGCGTCT CGGTGCTGTC CGTCTTGACC
    CAGCTCCCAC CGTTTCTTGC CGGTAGGGAG ACGGGCCTGA AGGAGCTTGG
    CGACACGCCG CTTGATTTCC TCGGTGTTTC GCCGATGCCG GCGTCTCATC
    TCGTCAAGGA ATTGCTCGAG CATCCGGAGG ACGAGTTGTG CAAGGCCATG
    GTGAACCGCT GGGAGCGCAA CACGGAAACC ATGGGCGTCC TGGTGAACTC
    GTTCGAATCG TTGGAGAGCC GGGCGGCTCA GGCGCTCAGG GACGACCCGC
    TCTGCGTCCC AGGCAAGGTG CTGCCTCCGA TCTACTGCGT CGGGCCTTTG
    GTCGGCGGCG GCGCGGAGGA GGCGGCCGAG AGGCACGAGT GCCTCGTCTG
    GCTCGACGCT CAGCCGGAGC ACAGCGTCGT GTTCCTCTGC TTCGGGAGCA
    AGGGCGTGTT CTCCGCGGAG CAGCTCAAGG AGATCGCCGT CGGCTTGGAG
    AACTCCAGGC AACGGTTCAT GTGGGTCGTG CGCACGCCGC CGACAACCAC
    CGAAGGCTTG AAGAAGTACT TCGAGCAACG CGCGGCGCCG GACCTCGACG
    CGCTCTTCCC GGATGGGTTC GTGGAGCGTA CCAAGGACCG TGGCTTCATC
    GTCACGACGT GGGCGCCGCA GGTGGACGTG CTCCGCCACC GGGCGACCGG
    CGCGTTCGTG ACGCACTGCG GGTGGAACTC GGCGCTGGAG GGCATCACGG
    CGGGGGTGCC GATGCTGTGC TGGCCGCAGT ACGCGGAGCA GAAGATGAAC
    AAGGTGTTCA TGACGGCGGA GATGGGCGTC GGGGTGGAGC TGGACGGGTA
    CAACTCGGAC TTTGTCAAAG CGGAGGAGTT GGAGGCCAAG GTGAGGCTGG
    TGATGGAGTC GGAGGAAGGG AAGCAGCTCA GGGCTCGTTC GGCTGCGCGG
    AAGAAGGAGG CAGAGGCGGC GCTGGAGGAA GGGGGCTCGT CGCACGCTGC
    GTTCGTCCAG TTCCTGTCCG ATGTGGAGAA TCTTGTCCAG AACTAACTGA
    CGAAAATTTG CAGATGCCCA GCATCTTGGC CACAAGTGAC GAAAATTCTC
    AGATGCTCTT TATTTGCCTG GGGACCGGGG GCCCTTTCAA CGATAATCAT
    TTAAGAACTA CTTGTGTACC TTATTTGTTG TTAATAAAGC AACGTACTAG
    AATGGCCGCG ATGATATTTA TCCCTTGTCT TTATTATCAG AGTATATGGA
    TAAAATCTAA TTGTATGGTT TGTTATGGT

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 2e-80; Score: 297.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UDP-GLUCOSYLTRANSFERASE 7.1e-106
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 7.1e-106
    Coil coiled-coil 0
    Gene3D no description 0.00000000000031
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 1.6e-30
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 1.7e-51

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR