K35548

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35548

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35548

Determination of introduced cDNA(s)

J033070C14 - Rice Full-length cDNAs - Original: J033070C14

full reading [+] show sequence

GACCGCACTC TCGCTGCTGC TGCTGCTGCT CGCGACGCCC CGAACCCCCC 
CATGTTCGCC GGCGGCGCGG ATGGCGGCAA CGGCCACCTG CCGCGGCCGC 
GGAGGGCGCG GCGCGGCGGC GGAGGCGGAG GAGGAATGGG GTCTCCTCCT 
CTGGGGCCGC CACCGCCGCC CTGCACCGAC TACGACATGG CCTACTTCAA 
GGCGTACTCC CACATCGGCG TCCACGAGGA GATGCTCAAG GACCATGTGG 
GAACTAATAC TTACAGAAAT GCTATCATGC ATCACCAGGA TTTAATTTCA 
GGCAAAGTTG TGTTGGATGT GGGCTGTGGC ACTGGTGTAC TTTCTATATT 
TTGTGCTTTT GCTGGTGCCG CTCGGGTCTA TGCAGTTGAT GCAAGTGATA 
TTGCCTTACA GGCTATGGAA ATTGTGAGAG AAAATGAGTT ATCTGACAAA 
GTCATTGTTC TGCACGGTCG AATTGAGGAT GTCGAAATTG AAGAAAAAGT 
CGATGTCATC ATATCTGAAT GGATGGGCTA CATGCTTCTG TATGAGAGTA 
TGCTGGGGAG TGTAATCTTT GCTAGAGATA AATGGCTTAA ACCAGGGGGT 
CTTATTCTTC CATCGCATGC ATCGCTTTAC CTGGCACCTA TTACAAATTC 
CCACAGATAT CAGGATAGTG TTTACTTCTG GCAAGACGTG TATGGTATAA 
AAATGTCTTC TATGATGCCT CTTGCAAAAC AATGTGCATT CATGGAGCCA 
TCTGTTGAGA CGATTAGTGG AGAGAATGTT CTGACCTGGC CATCAGTGGT 
GGCGCAGGTG GATTGTTATA CCATACAAGC TCCGGAGCTT GAAACTATCA 
CTGCTACATT TAACTATACG TCGATGTTGC AAGCTCCATT GCATGGTTTT 
GCATTTTGGT TCGATGTCGA GTTTAATGGA CCAGTGCGCC AGAGATCCAA 
GAAGCAAGCA AACCAATGCT TGGATGGGAA CACACAAGAT GCCAGCCCAA 
GTAATAAAAA GAAAAAGGCA GATGCCCCAA TTGTTCTGTC GACTGCACCG 
GAGGATGCAC CTACCCACTG GCAGCAGACC CTATTGTACT TGTTTGAACC 
TATCGAGCTA AAGAAAGATC AAAATATTGA GGGTTCTGTT ACCATATCTC 
AAAGCCAGCA ACATGCTCGC TTCCTCAACA TCTGCCTGAA ATATTTTACT 
AGAGATCAAT GGTATGTTAA AGAATCGGTG ATGAAATAAG ACGGGGGTAG 
CTTCAAGAGT GGACTGCAGG ATCTCATATT TGTTTTTCCT GTGCACGTTG 
AAGCTTACTT GCAATTTTGG AGAATCTTTG ACAAGCGTCA CGTACTGACA 
TCCTGATGAC AAGCGTCTTT TGGTTCCTAT TTGGAAAGCT GGATTTTTTT 
TTTAGGAATT GAGTGCAACT CCGCTAGAAT TCGTACAGAA ATCCTTTTTT 
TCTTGAAAAG GGCCTGATTA GATTAACAGC CTGATGATCA TGTGCATTCA 
GCTGATGAAA GGAGCAGTGA GAAACTCATA ATTACATGCC GACCAAGGGT 
GGGATAGGTT TTCCTGTTAA GTTTGTCTTA GCTCATGTCA TTTGGTTACG 
CTTTGTTATT TTTTCCTATA GACTAAGATA GCAATGTTCT TTTCTTTGTA 
AGAACAAATT GTCAACATTC ATGCGGCCCT TGTGGTAGGC TATCAGCGGC 
GTGATTTTCT GATTTTCC

Gene models with high sequence identity

AT3G20020.1 [+] show detail - protein arginine methyltransferase 6
E-value: 7e-130; Score: 461.00

InterPro Scan Digest

Program	Description	E-value
superfamily	S-adenosyl-L-methionine-dependent methyltrans	1.1e-64
HMMPfam	Ribosomal L11 methyltransferase	1.7e-11
HMMPanther	PROTEIN ARGININE N-METHYLTRANSFERASE 6	2.4e-134
HMMPanther	PROTEIN ARGININE N-METHYLTRANSFERASE	2.4e-134
Gene3D	no description	5.4e-55
Gene3D	no description	1.3e-48

See the detailed result >

AT3G20020.1

Model type: Protein coding
Short Description: protein arginine methyltransferase 6
Computational Description: protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 5878 Blast hits to 5804 proteins in 1733 species: Archae - 156; Bacteria - 3349; Metazoa - 1214; Fungi - 260; Plants - 392; Viruses - 1; Other Eukaryotes - 506 (source: NCBI BLink).
Link: InterPro Scan - TAIR