K35703

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35703

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35703

Determination of introduced cDNA(s)

  • J013102C12 - Rice Full-length cDNAs - Original: J013102C12

    full reading [+] show sequence

    Nucleotide sequence: J013102C12 - full reading
    GATTCCACTT CTCTTCTCTC TCGTGGTCGC ATGATCTCAT CAGGAGCGCA 
    GATGCTACGG CGTCCTTGAG AATTGCAGAG AGGCAAAAGA AGAACAAGCA
    GAGAGCAAGA ACAAGCAGAA GCAGAAGCAA AGAGGCGATG GACGGCGACA
    CGCTGTCGGC GGCGGCGGCG GAGGACGGGA AGGTGCTGCA CGCGTTCCAG
    ACGAGCTTCG TGCAGGTGCA GAGCTTGCTG GACCAGAACC GGGTGCTGAT
    CAACGAGATC AACCAGAACC ACGAGTCCAA GGTCCCCGGC GACCTCTCCC
    GCAACGTCGG CCTCATCCGC GAGCTCAACA ACAACATCCG CCGCGTCGTC
    GACCTCTACG CCGACCTCTC CTCCCTCTTC GCCGCCTCCT CCCCCGGCCC
    CGCCGCCTCC AAGGGCGCCT CCGTCGGCAC CGCCGTCCGC CACGCCGGCC
    ACAAGCGTGT CAGGTCCACC CACCTCGACT GAACAAGAAC CATTCTCATT
    TTCTCAATTA ACCACCTCCA ATTCTCCAAT TCCAATTCCA ATTTCGGCTA
    GCTTAGCTTA AAGATCGAGC TCTTGCTTGC TTGTATATCT AGCTATAATC
    TATAAATCTA CATATGAGCA ATTAACGCCC CCTCACAACT ACTCCCGATG
    TTTCATATTA TAAGACTTTC TAACATTTGC CTACATTCAT ATATATGTTA
    ATGAATCCAG ACATATATGT GTGCCTAGAT TCATTAACAT CTGTATGAAT
    GTGGGTAATG CTAGAAAGTC TTATAACCTA AAACGTAGGT AGTACAATCA
    TCTTCGGTTC TTTCTTGTAG CTGTTGTTTC ATCTTGTTGT AGCTGATATG
    ATGAGCTATT ATATGGATTT TGATGCAACA ATGCCAATAC AAGAGAGTGA
    GCACTTCTCT GAATTCCC

    Gene models with high sequence identity

    1. AT2G06255.1 [+] show detail - ELF4-like 3
      E-value: 1e-23; Score: 107.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF1313 9.4e-40
    Coil coiled-coil 0

    See the detailed result >

    AT2G06255.1

    Model type
    Protein coding
    Short Description
    ELF4-like 3
    Computational Description
    ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR