K35723

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35723

Determination of introduced cDNA(s)

J023089C22 - Rice Full-length cDNAs - Original: J023089C22

full reading [+] show sequence

GGCCGAGCAG AGCAGCGAAG AGGGCAGCGA AGTCGCCGAC GAGGAGGAGG 
AGAAGGAGCC ATGGCCGCCA GGAGCTTCCA GGCCCGGTCC CCCAAGGAGG 
AGTCCGACGC CGCCGTCCAT GAGGCAGTCA CGCTGGGATT GAAGAACGCA 
GCCATATCTG GTACCGTGGT TGCGGTCCCC ACGTTGGTTG GTTGCCGTGT 
CCTTCCTTGG GCTAAGGCTA ATCTCAACTA CACCGCACAA GCACTCATCA 
TATCAGCAGC ATGCATCGCT GGCTTCTTCA TCACTGCTGA TAAGGCCATT 
CTACGGAACG CAAGACAGAA CACCATTGGG AAGATTGACA GGTCAACCTG 
ATGCGCAACT GTACATATGA GAACGTTGTA CTGATTATCC ATTTCTTCGA 
TAGCAGGCGA GGTTGATGGG AGCAATAGGA ATCCATCTCT ATTATTCCGT 
TCATCCATGG ATGATTGGAC GTGTACTGCA ATGAATCAGC AATTTTTATG 
TTTTAATCTT AATTCCTTAT ATGAAAACCT AACCTCGCAT TGTAAAGACT 
AGGGCTGTTG CCTTTTAGAC CAGTGAATCC AGTTTGGTTC CAATTTGAAG 
TTGAATAAAA GATGGAAATG TAATGCTCTT TT

Gene models with high sequence identity

AT5G25940.1 [+] show detail - early nodulin-related
E-value: 1e-17; Score: 86.70

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Early nodulin 93 ENOD93 protein	1.4e-37
BlastProDom	Early nodulin 93 ENOD93 protein	4e-40

See the detailed result >

AT5G25940.1

Model type: Protein coding
Short Description: early nodulin-related
Computational Description: early nodulin-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Early nodulin 93 ENOD93 protein (InterPro:IPR005050); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR