K35807

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35807

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35807

Determination of introduced cDNA(s)

  • J013052J08 - Rice Full-length cDNAs - Original: J013052J08

    full reading [+] show sequence

    Nucleotide sequence: J013052J08 - full reading 
    GATTTTTGCT CGATCCAAAA CCCACCATAT CATCCGACTG CTAACGGGCG 
    GCGGTAGCTA TAGCAACCGC ACCCGATCCA AAGTCTTGTT AGTTCTTCCC 
    TAGCTAGCTA TTTAAGCTGG TATATGCGAT TCCATTTGGG AGCAATTCTG 
    CGCGGCGATG AGGGCCCAAC GACCGTCGTC GGCAGCTGCT GGCAATCCGG 
    TGCTTGCTCT TCTGTTTCTA TGGGTCCTTG GCTGGGGACA TGTAACGGCG 
    GAAATTGATA TCGCCAACAT GACGGCGCTA CATAAACATG TTTCGTTCTT 
    CGACCGGAAC AAGGATGGCA TTATTACTCC GTCGGAGACC ATTGAAGGGA 
    TTGTTGCAAT CGGTTGTGAC TATGCATTTG CTAGAGACTT TGCCGCCCCT 
    GTGCATGCTG GTCTTGGTCC TAAAACAAGC CCCAAGGACG CACCATTACC 
    TCACTTGTCG ATATACATAA AGAACATCTA TAAAGGAATG CACGGGAGTG 
    ACACAGGTGC ACTAGATGCT AAAGGAAGGT TTGTTCCTGC AAAGTTTGAG 
    GAAATTTTCT CGAAACACGC AAAAAATAGA CCAGATGCAT TAACATCCTT 
    GGAGGTCAAA GAGATGATTC TAGCAAATCG AGATCCAGAT GACCCACAAT 
    CATGGGCTGC ACCTATACAG GAGTGGGGGC TAATTTATGG TCTTGCAAGT 
    GATAAGAACG GATATTTTCA CAAGGATAGT GTGAGAGGTA TATATGATGG 
    TAGTGTGTTC GTCAAGTTGG AGGAAGAGAG GGCATCTTCA CAAAGTACAG 
    TTTGCCGGAG CCTATCATTT AGGAGTACTG TATAAAGTAA TTGGGAAATG 
    AAGTTATCCC AAATACATTG TATTGCATCA TAGGTATTGT TCGTGTACTT 
    ACAAAATGCC ATATTTGGAG AAGCACTGGT GTATGGTAGT GGAGTTATAG 
    TTGCATGACT TTAATCATTA TGATTTAAAT CTTGGTTTAT ATGAATATTA 
    TGTATATACG GATGCACTCT TAATAAGATT TGAGAAAACC TATTTTATAT 
    C

    Gene models with high sequence identity

    1. AT1G70670.1 [+] show detail - Caleosin-related family protein
      E-value: 2e-44; Score: 176.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Caleosin related 1.2e-66
    ProfileScan EF-HAND 2 9.13

    See the detailed result >

    AT1G70670.1

    Model type
    Protein coding
    Short Description
    Caleosin-related family protein
    Computational Description
    Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR