K36118

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36118

Determination of introduced cDNA(s)

J023052E08 - Rice Full-length cDNAs - Original: J023052E08

full reading [+] show sequence

GAACTGCTGC GTCCACTATG ACGTGTTCTG TTCGGAGGCC TCGATTCCAA 
TTCGAAGGTT TCGGAATCTG AAATGGCGGC GGCGGCGGTG CGGGCGGCGG 
AGGAGCTTGC GGAGAGGGAG ATGGCGGGGC GCGACGCCTC CCACGACGCC 
GCCCACGCCC TCCGCGTCCG CGACCTCGCG CTCTCCCTCG CCGCCGAGCT 
CGGCCTCTCC TCCTCCCCCG ACCGCCTCCT CATCGTGGAG ATAGCCGCGC 
TCCTGCATGA CATCGGTGAT TACAAGTACA CCAAGGACAA TGCTGAGGAT 
ATGAGCATCG TGGAGAGGTT TCTTGAAGAG GTGGAACTGG AGCAGGGCCA 
GAGGGAGGAA ATTGTGGCGA TCATTAAGGG GATGGGATTC AAAAATGAAG 
TTTCAAAGAA GTCTGTTGTT GAGCCTACTC TTGAGTTTGC AATTGTACAA 
GATGCAGATC GTCTTGATGC AATTGGTGCA ATTGGTATTG CAAGATGTTT 
TACGTATGGT GGGAGCAAGA AAAACACATT GCATGATCCT AAGATACTGC 
CGCGTGATAA TTTGTCAAAG GAGAAATACA TGTCCAAGGA TGAAAAACAG 
ACATCAATTA ATCATTTCCA TGAGAAGCTA TTTAAGTTGA AGGACATGAT 
GAAGACAGAG GCCGGGAAAA AGAGAGCAGA GAAAAGGCAC AAGTTCATGG 
AGGACTTTGT GGCTGAATTC TATGAAGAGT GGAGTGGCAG AGCTTGAAGT 
TGACCAACCA GGTTATGGGC TGTTGGTCTG TGGCATAGCT TGAAGTTGGC 
CAACCAACAA CAACTCATAT TGCTAGTCGT CTACTTGGTG ACATTAGCAT 
GTTTTGTTGC TGATATGTTA AGCCATGCAA AAAAACGAGG GATAAAGCAC 
ACTTGAGTGG CCAAACCACT GAATAATGCT CCTCAACAGG TACTTTGCCT 
GAACTCTGAT TTTTTTCTGG AGCACCTGTG ATTGATGTAC ATTTGATCGG 
CAGCAAAACC

Gene models with high sequence identity

AT1G17330.1 [+] show detail - Metal-dependent phosphohydrolase
E-value: 6e-61; Score: 231.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Metal-dependent phosphohydrolase, HD subdomain	1.1e-09
HMMSmart	Metal-dependent phosphohydrolase, HD domain	3.3e-11

See the detailed result >

AT1G17330.1

Model type: Protein coding
Short Description: Metal-dependent phosphohydrolase
Computational Description: Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink).
Link: InterPro Scan - TAIR