K36138

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36138

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36138

Determination of introduced cDNA(s)

  • J033102I19 - Rice Full-length cDNAs - Original: J033102I19

    full reading [+] show sequence

    Nucleotide sequence: J033102I19 - full reading 
    GAATTCCCTT CCCCAATCCA GCAAGCACAA CCATGGCGGC CGCTGTCCTC 
    CTCCTCCTCC TCCTACCGGC CCTCGCCGCC GCCCAGGCCC AGGCCCAGCA 
    GATGCGGACC TTCTCCGCCA ACGACACCAA TTGGAGCCCC GCCGAGAGCA 
    ACCGCACCCT CGTCTCCAAC AACGGGGACT TCGCCGCCGG ATTCCGGCCC 
    TCCCCCTCCT CCCCAGCCAA GTTCTGGTTC GCCGTCTGGG TGAGCGCCAA 
    CGCCAACGAG TCCAGGCCGG TCGTCATATG GTACGCCCAC AACGACGACC 
    ACTCCGCCGT GGAGGGCGAC GCCAATTCCG TGCTCTCCAT CGACGCGGCG 
    GGGAAGCTGT CGTGGAGCGA CAACGGCAAC AGCACCACCC TTTGGTCCCG 
    CAACTTCAAC TCCACGAGTG CCCCTTTGTC TCTGAACGAC TCGGGGAGCC 
    TCGACCACGG CGCCTGGTCC AGCTTCGGGG AGCCGACGGA CACGCTGATG 
    GCGTCGCAGG CCATCCCCAG CATTAGCAAC GGCACCACCA CCACCACCAG 
    CATCACCCTG CAGTCCCAGA ACGGCAGATT CCAGCTGTTC AACGCCCTCA 
    CCCTGCAGCA CGGCTCCTCC GCCTACGCCA ACATCACCGG CAACACCGCC 
    CTGCGCAACC TCACCGCCGA CGGCACGCTG CAACTCGCTG GTGGCAATCC 
    CTCCCAGCTC ATCGCCTCCG ACCAGGGCTC CACTCGCCGC CTGCGCCGCC 
    TCACCCTCGA CGACGACGGC AACCTGCGCC TCTACAGCCT GCAGTCCAAG 
    AAAGGGCAGT GGCGGGTGGT ATGGCAGCTG GTGCAGGAGC TCTGCACCAT 
    CCGGGGCGCC TGCCAAGGGG AGGCCAACAT CTGCGTCCCC CAAGGCGCCG 
    ACAACACCAC CTGCGTCTGC CCGCCGGGGT ACCGCCCGCA GGGCCTGGGC 
    TGCGCCCCCA AGCTTAACTA CAGCGGCAAG GGCAACGACG ACAAGTTCGT 
    GCGGATGGAT TTCGTTTCCT TCTCCGGTGG CGCCGACACC GGAGTGTCCG 
    TCCCCGGCAA GTACATGACC AGCCTGACGC CGCAGAACCT GGCGGACTGC 
    CAGAGCAAGT GCCGGGCCAA CGCCTCTTGC GTGGCCTTCG GCTACAAGTT 
    GGGCGGGGAC CGGACGTGCC TGCACTACAC GCGGCTGGTG GACGGCTATT 
    GGTCGCCGGC GACGGAGATG TCGACCTACC TGCGGGTGGT GGAGTCGAAC 
    AACGACCCGA ACAACTTCAC GGGGATGACG ACGATGATCG ACACGGTGTG 
    CCCGGTGCGG CTGGCGCTGC CGGTGCCGCC GAAGCAGGGG CGGACGACGA 
    TCCGGAACAT CGCCATCATC ACGGCGCTGT TCGCGGTGGA GCTGCTGGCG 
    GGGGTGCTGT CGTTCTGGGC GTTCCTGCGC AAGTACTCGC AGTACAGGGA 
    GATGGCGCGG ACGCTGGGGC TGGAGTACCT CCCCGCCGGC GGGCCGCGGC 
    GGTTCTCGTA CGCGGAGCTG AAGGCGGCGA CCAAGGAGTT CTCGGACTTG 
    GTGGGGCGCG GGGCGTACGG GAAGGTGTAC CGCGGGGAGC TGCCGGACCG 
    GCGGGCGGTG GCAGTGAAGC AGCTGGACGG GGTGGGCGGG GGAGAGGCGG 
    AGTTCTGGGC GGAGGTGACC ATCATCGCGC GGATGCACCA CCTCAACCTG 
    GTGCGGATGT GGGGGTTCTG CGCGGACAAG GAGCAGAGGA TGCTGGTGCA 
    CGAGTATGTG CCAAACGGAT CGCTGGACAA GTACCTGTTC GCTCCAGGCA 
    CCGGCACCCA AGGAGACGAA GAAGAGAGCA ACAAGCGGCC TCTGCTTGAC 
    CTGCACACCC GCTACCGCAT CGCTCTGGGC GTGGCGCGCG CCATCGCGTA 
    CCTTCACGAG GAGTGCCTCG AGTGGGTTCT GCACTGCGAC ATCAAGCCTG 
    AGAACATCCT TCTGGAGGAC GACTTCTGCC CCAAGGTGTC CGACTTCGGG 
    CTGTCCAAGC TCACCAGCAA GAAGGAGAAG GTGACCATGT CCCGCATCCG 
    TGGCACCCGC GGGTACATGG CCCCCGAGTG GGTCATCCAC CGCGAGCCCA 
    TCACCGCCAA GGCCGACGTC TACAGCTTCG GCATGGTTCT GCTTGAGATC 
    GTCTCCGGCC GCCGCAACTA CGGCTTCCGC CAGGACTCCG TCGGCAGCGA 
    GGACTGGTAC TTCCCCAAGT GGGCCTTCGA GAAGGTCTAC GTCGAGCGCC 
    GCATCGACGA CATCATCGAC CCTCGCATCG TCCAGGCCGA GGCCTACGAC 
    GACGACCCCG CCAGCCTCGC CACCGTCGAG CGCATGGTCA AGACGGCCAT 
    GTGGTGCCTT CAGGACCGCG CCGACATGAG GCCCTCCATG GGCAAGGTCG 
    CCAAGATGCT CGAGGGCACC GTCGAGATCA CCGAGCCCGT CAAGCCCACC 
    ATCTTCTGCG TCCAGGACGA CTGATCTCTC CTAGGAGTAC TCCACTTCTT 
    GCCACGAGAG ACACACAAAT TATCTTTCTT ATTTATTATA CTAGTACTAG 
    TTCAGATCAG ATCAGAGCAG AGCACTGCAT ATCCTGCGTT GTCTGATTTG 
    CCTGCTGGGC TCACGACAGC AACTGAGCAA GGCAAATGTA CATGATGAGT 
    GGATTACGCT TCAAAATGAT ACGCACCATC AAATTCGTCG GCATCTCTCT 
    CGTAGGCTCA GCGCAGATAT CATGACATAT ATTTACCTTT TTTTTATTAG 
    TAAATTTCAT AAAACTACAT ATACTTTGAC TAAATTATCA TAAAACTACA 
    TATTTAAGGT C

    Gene models with high sequence identity

    1. AT1G34300.1 [+] show detail - lectin protein kinase family protein
      E-value: 4e-88; Score: 323.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 9.6e-19
    Gene3D no description 2.4e-45
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    PatternScan EGF-like region, conserved site 0
    HMMPanther S-RECEPTOR KINASE 5.5e-202
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 5.5e-202
    ProfileScan Protein kinase, catalytic domain 35.354
    ProfileScan Curculin-like (mannose-binding) lectin 8.579
    ProfileScan Apple-like 7.519
    HMMPfam Serine/threonine-protein kinase-like domain 6.3e-46
    HMMPfam Curculin-like (mannose-binding) lectin 0.000000016
    HMMPfam S-locus glycoprotein 0.0000025
    HMMPfam PAN-2 domain 0.000058
    superfamily Protein kinase-like domain 6.3e-72
    superfamily Curculin-like (mannose-binding) lectin 0.0000000012
    superfamily Curculin-like (mannose-binding) lectin 0.012
    HMMSmart Serine/threonine-protein kinase domain 7.2e-28
    HMMSmart Tyrosine-protein kinase, catalytic domain 0.000000000000007

    See the detailed result >

    AT1G34300.1

    Model type
    Protein coding
    Short Description
    lectin protein kinase family protein
    Computational Description
    lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR