K36205

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36205

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36205

Determination of introduced cDNA(s)

  • J013133L14 - Rice Full-length cDNAs - Original: J013133L14

    full reading [+] show sequence

    Nucleotide sequence: J013133L14 - full reading 
    GGGACACCCC AGTGAGCTCT CACAGTCCCT CGCGTTGTCG CTGTCCGCCA 
    GAGCGCCAGA CCACCACGGC GTGCACCCTC CGCAACCGCA GCCACACGGA 
    GGAGCTTCGC GGCCGCACGC CGTGAGCCAA ACCCTTGCCG TCGGGGCTAG 
    GCCGCCGGTG GGGAGGCTTC GGGAGGTGGG GTCCTGCCGG AGCCGCCGAT 
    GGCGGAGGAC GGCGAGGAGA AGCTGCTCGC CACGGTGCAG CACATCGTCA 
    AGACCCTGGG CCGCACCGAC ACGATGACGG AGGATATACT GAAGGTCTTC 
    TCCAACTACG ACGGCCGCCT CTCGCTGGAC AAACTCTACG CCACGCGGGC 
    TGCGGCGGCG GCGGCGGCGG TCGCGGCGGC TGGAGGAGCG GGTGCTGGGG 
    AGCACTCGGT GCCGGCGTCG CCGCCGATGC CGCCCCCGCC CGCGGTTCCC 
    CCGGCGGTGG CGGCGATGCC GGCGGTGACG TCACTGGAGC GGACCGTGCG 
    CACGCTGGAC CGGCAGATCT CGCAGTTCGT GACGATGGAT AGGCTGATTT 
    GGGCCGACTC GGCGGACGCG GACGCGTTCC TGGAGGCGGT GGACGACCTA 
    ATCGGCACCG TGCAGGAGCT GGACGCAGCT GGGACCAACC GCGGGCTGCT 
    CGACCGTGCC GATGAGCTGC TCAGCCGGTG TATGGCCCGG CTGGAGGATG 
    AATTCCGGGC GCTCATAGAG CGCCCCGACG ACGTGGCGCC GCCAGCGCCC 
    GGCGGGTTCG CTTCTGATGA GAGCGAGGAG GAGGACTACG ACGCGGACGA 
    CGGCTACGGC GATGAGCCAA TCCCAATCGC CAAGCCGGTC TCGGACTTCG 
    ACGTGGTCAT CGACGCCCTC CCCCCGGGAT CGGTCTCCGA CGTGCACCAG 
    ATCGCGAGGC GGATGGTGGA CGCTGGCTTC GGCCGCGAGT GTGCCGAGGC 
    GTACGCGGCC GCACGCCGCG GATTTATCGA CGAGAGCGTC GCCCGCCTCG 
    GCATCCGTGC CCGCACTATC GACGAGGTTC ACTCCTTGCC GTGGGAGGAG 
    CTCGAGTTCG ACATTGCCCG ATGGATCCCG GCCTTCAAGA TGGTGTTCCG 
    CATCCTGATC CCCAGCGAGC GCCGCCTCTG CGACCGTGTC TTTGACGGCC 
    TCGCCCCTTA TGGCGACCTC GCTTTTGTTG CTGCAGTTCG TACCCAGGTG 
    CTGCAGCTTA TCTCCTTCGG CGACGCAGTT TCTGCTGCTA GTCGTGCTCC 
    AGAGCGCCTC TTCCGTGTCA TTGACATGTA TGAGGCCGTG CGAGACCTCC 
    TTCCTGACCT CGACCCTGTC TTTGCTGATC CCTACTCTGC TGCACTTCGT 
    GCCGAGGTCT CTGCTGTTTG CAACACCCTT GGTTCCTCTA TCAAAGGTAT 
    ATTCATGGAA TTGGAAAATC TCATCCGACG TGATCCTGCC CGTGTTTCTG 
    TTCCTGGTGG TGGCATACAC CCAATCACCC GGTATGTGAT GAACTATCTC 
    CGTGCTGCGT GTGGATCAAG ACAGACACTG GAAGAGGTGA TGGAAGGTGA 
    CTTAGGTGCT GTTGGCGGGG CAGCTATTGC TGTTGATCCC GATCGCCCCA 
    CTTCGTCACT TGCAGTGCAC ATTGCATGGA TCATGGATGT GCTTCACAAG 
    AATTTGGAGA CCAAATCTAA GATATATAGG GACCCGCCAC TTGCATCCAT 
    ATTCTTGATG AACAACGGGA AGTACATTAT TCACAAGGTG AATGACAGTG 
    AGCTTGGGGT TTTGCTTGGT GATGAGTGGA TGAAGCAGAT GATGAGTAGA 
    GTGCGCCGTT GGAGTTTGGA GTACCAGCGT GGGGCTTGGG CAAAGGTCAT 
    GTCAGTGTTG CAGACGGGTG GTCCTGGCAT TGGTAGTCTC CCTGCAAAGG 
    CCTTGCTACA AAAACTGCGG ATGTTTAATG GCTACTTGGA AGAGATATGT 
    GCTATCCAGT CAGAATGGGT GATTGCAGAT GAGCAGCTGC GCGAGGATGT 
    TAGGGCAGCA ATAACAGATT CTGTGAAGTC TGCATATATG GGCTTGATTT 
    CAAGGTTGAA ATCATCTCCG GAAGCTGCAC AGGACTTGTT CATCAAGCAT 
    TCCCCAGAAG ATGTCGAAGC ACGAATCCAG CACCTGTTTG AAGGAGTGTC 
    CAAGTGATTA TTAGTTCATT ATAGTCACTA TGCTTCTATA GCTGTGATTT 
    TGGTGTCATT GTTGCTGCTA TGGTGGATAT CTGAACACTG GTGATGCCAT 
    TATGTGTTTG GTGGCATTGT TCCATAAGGT TTACTTTTCA TCTTAGATGA 
    GAAAATTATG GGTTTCTTAA ACTTTGTAAA TTATCCTAGG TGTCTGTTTA 
    ATTATCAATT GGTAATGCAA TCTAATTTAT GATGTTATTG

    Gene models with high sequence identity

    1. AT5G58430.1 [+] show detail - exocyst subunit exo70 family protein B1
      E-value: 3e-150; Score: 529.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther EXOCYST COMPLEX PROTEIN EXO70 7.6e-124
    HMMPanther Exo70 exocyst complex subunit 7.6e-124
    HMMPfam Exo70 exocyst complex subunit 3.7e-92

    See the detailed result >

    AT5G58430.1

    Model type
    Protein coding
    Short Description
    exocyst subunit exo70 family protein B1
    Curator Summary
    A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
    Computational Description
    exocyst subunit exo70 family protein B1 (EXO70B1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B2 (TAIR:AT1G07000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR