K36325

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36325

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36325

Determination of introduced cDNA(s)

  • J023026H17 - Rice Full-length cDNAs - Original: J023026H17

    full reading [+] show sequence

    Nucleotide sequence: J023026H17 - full reading 
    GGGCGGTGGC GGAACGGTCA CTTCTCTTCT TCACCCGACG CAACAATCCC 
    ATCGCTGGTG GCGATTTCGC GAATCCACCT CGTTTAAAAA GGCAAAGTCT 
    AGCCTAGCTT TCCTCCCTCT TGCTCGCCGG CTGCGGAGAA GGGGTTCGAG 
    TGAGATAGAA TCCGGAGGAG GAGGAGGAGG AGATTGCGGC GGCCGGACGG 
    CGGCGGATCG GTTGATTGAT TGATTGGTTG GTTGGTTGGT TGGGTTGATC 
    GATGGCGTTC TTGGGGAACG GCTACTGCTC GTCGGGGTCG GAGGGGGAGG 
    ACGAGGACGA GGGGATGGAG GGGTACCGGA AGGGAGGGTA CCACGCCGCC 
    AGGCCCGGCG ACCGCTTCGC CGGCGGGAGG TTCGTCGCGC AGCGGAAGCT 
    CGGCTGGGGG AACTTCTCCA CCGTCTGGCT CGCGTACGAC ACCCTCCTCA 
    ACAGATTTGT CGCGCTCAAG ATCCAGAAAA GCGCGAGGGA TTACGCACAG 
    GCGGCACTCC ACGAGATTGA GTTGCTGTCG GCGATAGCCA AAGGTGACCC 
    GACAAATTCC AAGAATGTTG TGCAATTGCT GGACCATTTC AAGCATGCTG 
    GTCCAAACGG ACATCACGTT TGCCTGGTCA CCGAGTTCCT CGGTGATAGC 
    TTGCTAAGGT TGATACGGTA CAACCGGAAT AAGGGCATTG GTCTGAGCGG 
    AGTCAAGGAA ATCTGCCGAT CAGTGTTGGT CGGTCTTGAT TACTTGCACA 
    GAGAGCTCGG CATCATCCAC ACGGATTTGA AGCCGGAGAA TGTTCTTCTT 
    GTATCGACAA TAAACCCATC GAAGGACCCA GTGCGCTCTG GGTTCACACC 
    GATTCTTGAG AGAACTGTGA GCAACCAGTA CAGCGGATCA GTAATTAGTT 
    TCAGTGAGAA GATGCTTAAG ATGCGGGCAA GACGCGCTGT CGCCAAGATT 
    TCACTGAGGA GGGAGTCTCT TGGTGGAGTT GCAGCAGAGA TGGAGAAGGA 
    GAGAAGCCTG GATGGTATTA GCTTGAAGTG CAAGATTGTT GATTTTGGGA 
    ATGCCTGCTG GGGTAGTCAG CAGCTTGCTG GTGAAATTCA GACAAGGCAG 
    TACAGAGCTC CTGAGGTGAT CATTGGTGCT GGGTACTCAT ATTCTGCTGA 
    TATGTGGTCA TTTGCTTGCA TGGCCTTTGA GCTTGCAACC GGTGAAGTGC 
    TGTTTGCTCC CAAGACTTGC CAGGGCTGTA GTGAAGATGA GGATCACTTG 
    GCTCTGATGA TGGAAACCCT TGGAAAGATG CCTAAGAAGA TTGCTAGCTC 
    AGGTACTCGT TCAAAGGATT ACTTTGATCG GCATGGAGAT TTAAAGAGGA 
    TCAGAAGGCT GAAGTTCTGG CCTCTAGAAC GTCTACTTGT TCAGAGATAC 
    AATTTCACTG AACCTGATGC CCAAGGTTTA GCTGATTTTC TTCGTCCAAT 
    TCTAGATTTT ACTCCTGAAA ACAGACCCAC AGCTGCAGCT TGCTTGAAGA 
    ATCCATGGCT TAACTGATTC GACGATACGG TGACTTTTGA AGCCTAACAA 
    GTAGAATCTT ATACAAGCTA TGTTGACTAT CAATTACTCT GTTTGACTGA 
    GAATGCAGAG AATTATGGCC TTGGTTCTTT GCCTTCTGCA AGCTTTCTGC 
    TAGCTTGGAG AGCTTGGTTT TTCTGATGCA GCTCAGTTTT CATAGAGCAA 
    ACAGTAGACA CCCTCATTAT CTGGATATTG ATAGCAAAGA TGTTGGGGGT 
    ATCATCAGAG TGATTCTTGA GCTCAAGTTT CCTTTTTCTT TTATGAAATG 
    CTTGACCATC ATCATGTATC TGGATGTAGT AGCAGAATTT CCATTAGTGT 
    GTTTTGGGTG TGGAGCTAGT GAAATGCTAA TTAACGTCAG CATGTGCGCT 
    GGCCTGAATT CTGTCGGCTG TGCCTCGTGT TGATGTAAAG ATAAATATTT 
    GCTAATGTGA TCTGGGCCAT CTGGCAGTGG CTACC

    Gene models with high sequence identity

    1. AT2G17530.3 [+] show detail - Protein kinase superfamily protein
      E-value: 7e-163; Score: 571.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 3.2e-79
    Gene3D no description 1.4e-57
    HMMPanther SRPK 1.1e-137
    HMMPanther CDC2, MAP KINASE-RELATED 1.1e-137
    ProfileScan Protein kinase, catalytic domain 33.771
    HMMSmart Serine/threonine-protein kinase domain 1.3e-56
    HMMSmart Tyrosine-protein kinase, catalytic domain 2.1e-05
    HMMPfam Serine/threonine-protein kinase-like domain 1.4e-44

    See the detailed result >

    AT2G17530.3

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G35500.1).
    Link
    InterPro Scan - TAIR