K36413

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36413

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36413

Determination of introduced cDNA(s)

  • J033094B09 - Rice Full-length cDNAs - Original: J033094B09

    full reading [+] show sequence

    Nucleotide sequence: J033094B09 - full reading 
    GGGCTTTCTG CCTCGCTCTT TATTGGGTGT GCTCGCTGCT CGTCTTTGTG 
    CCGCAGCTCA GCCTCAGTGC AACCCACTCG CTCTCTCTCA CTCTCGCCGC 
    GGCTTAAAGC GCACACGGCA CGGCGGGGGC GGCGGCCACT TCCACATCGC 
    CATTAATGAG CCTGGAGCAA GCCCCATAGG CCGTAGTAGT AGTGCTACTA 
    GCTTCATCAG CTCCACCTCG CTCGGAAGAG ATCGTCTCGT CGAGCGAGGC 
    CCTTTTTGCT CCCCCAATGG ATTCTTGCCG CAGCTAGTGT TTCTTGGCGA 
    TTCTTGCGGC GCTTTGGGAG CTGACCGGTG AAGAGCTCTC TTTGAGGCGA 
    TGGGTTGGGC GTGGCGGAGG GAGCAGTGGG CGGTTGCATG GCTGTCCGTG 
    GCGGTTCTTG GGGCGGCGCT GGTGGGCGCC GCTGGCGCGT TCGAGGAGGG 
    CACGGCGGTG TACATTGTGA CCATGAAGCA GGCGCCGGTG TTCCACAAGC 
    GCCTCGACCT GGAGAGGTTT GGGAGCAGCA GAGTCGCCGG CGGCGGCGGC 
    GGCGGCGGGG GGGACACCCC GTCCACTAGC ATCCTCATGA AGCCAAGGCA 
    TGGTCCAGCC CAACCTATGA ATTATGGCTC GTACTTAGTT CGTCTTCAAA 
    ATTCACTCTT GAAGAGAACA CTGAGAGGAG AGCGCTATAT AAAGCTCTAC 
    AGCTACCGCT ATCTGATTAA TGGTTTTGCT GTTGTCATCA CTCCTCAGCA 
    GGCAGAGAGG CTATCTATGA CGAAAGAAGT GGCAAATGTA ATGTTGGACT 
    TCTCAGTTAG GACGGCAACA ACTCATACCC CTGAATTCCT TGGTTTGCCA 
    CAAGGAGCAT GGGTTCAAGA GGGTGGCCCA CAATGTGCTG GTCAGGGTGT 
    TGTTGTTGGC CTCATCGACA CAGGAATCGA TCCAACTCAT CCCAGCTTCG 
    CAGACGACTT GATAACTGAC AGTTATCCTG TTCCTGCTCA TTACTCTGGC 
    ATTTGCGAGG TTACAAATGA TTTTCCATCT GGATCCTGCA ACAGAAAACT 
    TGTGGGAGCT AGGCATTTTG CAGCCTCTGC AATAACCAGG GGAGTGTTCA 
    ATGCCTCTCA AGATCATGCT TCACCTTCTG ATAGTGATGG TCATGGGACC 
    CATACAGCAT CCATAGCAGC TGGTAATCAT GGAATTCCTG TTGTTGTGGC 
    TGGGCATCAT TTTGGGAATG CAAGTGGAAT GGCTCCTCGT GCACACATTG 
    CTGTCTATAA AGCTCTGTAC AAAAGCTTTG GAGGGTTTGC TGCTGATGTA 
    GTAGCTGCAA TAGATCAGGC AGCTGAAGAT AATGTTGATA TAATCAGCTT 
    ATCCATTACC CCAAATAGAA GGCCTCCTGG ACTAGCCACC TTCTTTAATC 
    CAATTGACAT GGCTCTTCTT TCAGCTGTAA AAGCTGGCAT ATTTGTCGTG 
    CAAGCTGCAG GAAATACAGG TCCTTCCCCC AAGAGCATGT CATCATACAG 
    TCCATGGATT TTTACTGTAG GAGCATCTGC CCATGACAGG GAATACAACA 
    ACTATGTTGT ACTTGGCAAC AATCTGACCA TTACAGGAGT TGGCCTTGCT 
    CCTGGAACAG ATGGTGATTC CATGTTCACT CTAGTTGCTG CACCTCATGC 
    ACTGAAAAAC AATGTAGCCA GTCCTACTGA AATGTCCCTA GGGGAGTGCC 
    AAGATTCAAG CCACCTTGAT GAAGATCTGA TAAGGGGAAA GATACTGGTC 
    TGCAGCTATT CCATACGATT TGTACTTGGC CTGTCGTCTG TGAAGCAAGC 
    TTTAGATACT GCAAAGAATG TCAGTGCTGC AGGAGTTATA TTCTATCTGG 
    ATCCATTTGT CATTGGATTC CAGCTGAATC CAACTCCAAT GGATATGCCT 
    GGACTTATAA TACCATCATC TGATGACTCT AAGGTATTTC TAAATTATTA 
    CAATGAGTCC CTTGTGAGAG ATGAGACCTC AAACAAAATC GTCAGCTTTG 
    GTGCAATTGC AAAAATACTA GGAGGCCAAA ATCCAAATTA TGGTATTTCT 
    GCCCCAAAAG TAATGTTTTA TTCTGCCAGG GGTCCTGATC CTGAGGACAA 
    CTCACTGGCC AATGCTGATA TCCTGAAGCC AAATCTGATA GCACCTGGCA 
    GTTCCATTTG GGGTGCTTGG AGTTCTCTTG GATTGGACTC TGCTGAATTT 
    GCTGGTGAAA GTTTTGCAAT AATTTCCGGT ACAAGTATGG CTGCACCACA 
    CGTTGCTGGG CTTGCTGCTC TAGTCAAGCA GAAGTTCCCT TATTTTAGCC 
    CTGCAGCTAT AGGTTCTGCA TTATCGACTA CTACAAGTCT CAGTGACAGG 
    GAGGGGAATC CAATCATGGC ACAGAGAACA TACGGCAATC CAAATTCAAC 
    TCAATCTCCA GCTACACCTT TTGACATGGG AAATGGATTT GTCAATGCTA 
    CTGCTGCTTT GGATCCTGGG CTCATATTTG ATTCCAGTTA CGACGACTTC 
    TTCTCCTTTC TATGTGGGTT CGGTATATCG ACTCCAGAGC ATGTGAAGCA 
    GATTGCGGGA TGGGGCGCAG ATGGTGTGAT CATTGGGAGC GCTATGGTGA 
    GGCAATTGGG CGAAGCTGCT TCACCCGAAG AAGGATTGAA GAAGCTAGAA 
    GAGCTAGCCA AGAGCCTGAA GGCTGCATTG CCCTGAAACA ATCAGTTCCA 
    TGAGGAAAGA AAATACAGTC CATTTTTTTG TAGTCAGGTT TGAAGCATAG 
    TATTGGGAGC ATGACTTTTG CTATTGGGGT TTTCGGGGTT ACTGTTGTCT 
    GTTGAAAATA ATTAAGTCAT TGTGTTAGTT GCTTGAACGA ATAAATCAAG 
    GTAAGAATGA TACTACATGT TGC

    Gene models with high sequence identity

    1. AT4G20430.1 [+] show detail - Subtilase family protein
      E-value: 0; Score: 902.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Peptidase S8/S53, subtilisin/kexin/sedolisin 4.4e-64
    Gene3D Aldolase-type TIM barrel 5.2e-09
    HMMTigr Tryptophan synthase, alpha chain 0.0031
    HMMPfam Peptidase S8/S53, subtilisin/kexin/sedolisin 4e-38
    HMMPfam Proteinase inhibitor I9, subtilisin propeptide 3e-16
    HMMPfam Tryptophan synthase, alpha chain 9.1e-13
    HMMPanther SUBTILISIN-LIKE PROTEASE (PLANT) 3.5e-215
    HMMPanther Peptidase S8, subtilisin-related 3.5e-215
    PatternScan Peptidase S8/S53, subtilisin, active site 0
    PatternScan Peptidase S8/S53, subtilisin, active site 0
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 1.4e-20
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 1.4e-20
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 1.4e-20
    superfamily Peptidase S8/S53, subtilisin/kexin/sedolisin 3.9e-70
    superfamily Ribulose-phosphate binding barrel 1.3e-16

    See the detailed result >

    AT4G20430.1

    Model type
    Protein coding
    Short Description
    Subtilase family protein
    Computational Description
    Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G44530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR