K36419

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36419

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36419

Determination of introduced cDNA(s)

  • J033127K18 - Rice Full-length cDNAs - Original: J033127K18

    full reading [+] show sequence

    Nucleotide sequence: J033127K18 - full reading
    GGGTCAGCAC TGACGAGTCG AGCACTACAT CTCTCGTCCA ACGCCAAACT 
    CTCTCTCTCT CTCTCTCTCT CTCTCTGCAG ATAGATAGGT AGATCCGATC
    GCGGCGAGGA AGATCGATGA GTCGGATACA CCCTTCGTAT CAACGCCAAG
    ATGCCGCCGC CGCCGCCGCC TCAACGGCAG CGCCGCGAGC GGCGGTGTAC
    ACGGTGTGGA AGAGGTCCAG CATGGGGTTC CAGGGCACCG ACGGCTTCTC
    CGTCTACGAC GACGCCGGCA GCCTCGCCTT CCGTGTTGAC AACTACTCGC
    GCCGCCGCAA GCTCTTCTCC GGCGACCTGC TGCTCATGGA TGGACATGGC
    TCGCCTCTCC TCGCCCTCAC CCCACAGATT ATCAGCATGC ATGACCAATG
    GAATTGTTAC AGAGCGTCAG AAGAAGGCCA AGGCAAGAGG GCAAGATCAC
    AACAACTCTT CTCAATGAGA AAATGCTCAG TTATGCAAAG CAGTCATGAA
    GCAGAAGTGC ACATGTCAGG ATGTACCCAT GCGTCGTCAG ATCGTACTGG
    CCATGTTCCC GCCTTCTCAA TCGAGGGCAG TTTCAAGAGA AGAAGCTGCA
    AGATCCGCAA CAGCGGCGGT GAGGAGGTCG CAAGGATAAC GAGGAAGAAA
    GCTGGAGCAG CATCATTGTC ACTGACTCTT GCTGAAGATG TTTTCAGTCT
    TGAGGTCCAA CCGAATGTAG ATTGTGCGAT GATCATGGCT TTCGTCATTG
    TTCTGGATCG GATCTGCTGG AAGCCATACA CACCTATGAT CTGTTCTTCA
    TAGTTCAAGG TGATGAGCTC TATTTGACAT GTAGGAAATA GATGTTTCAA
    TTCAAGTGAA ATCGACGAAT TAACTCAAGA AGCTAGTATG AGACTGTAGT
    CACTAATTGT ACTGTCGATT GACTGGGACT AACATAACAT GTAACTTGTT
    CTAAATTTGA CTACTTATGA AAGGAAGATC GAATTAGCAG ATTG

    Gene models with high sequence identity

    1. AT1G80120.1 [+] show detail - Protein of unknown function (DUF567)
      E-value: 3e-18; Score: 89.70

     

    InterPro Scan Digest

    See the detailed result >

    AT1G80120.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF567)
    Computational Description
    Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR