K36421

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36421

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K36421

Determination of introduced cDNA(s)

  • J013050I03 - Rice Full-length cDNAs - Original: J013050I03

    full reading [+] show sequence

    Nucleotide sequence: J013050I03 - full reading 
    GGTGTGACAA TCGTCAGACT TTGAATCCGG AGACAGTGTC AGACAAAAAA 
    ATCGTGTTCA CTGGCCAGCC TCTTCTACCC TTCTTCTGAT CCTCTCCCGT 
    ATAGCCATTT CGTCGAACAC CTTCCCGAGC CGACTGCCGC CGCCGCCGCC 
    ATGCTCCTCG CGAAGCCCCA CCTCTCCTCC TCCTCTTTCC TCCCATCCAC 
    GCGGGTGTCT AGCCCCGCTC CGGGTCCGAA CCACGCAAAG CCCATCGCCG 
    CCTCTCCCGC CCCTCGACGC TGCCTCCGTC TCGCCGTCAC ATCCGCCGCG 
    GCGCCGGCTG CTTCGTCGGC GGAGGCGGCG GCGGCGCTGA GCCGCGTGGA 
    TGTGCTCTCA GAGGCGCTCC CCTTCATCCA GCGCTTCAAG GGGAAGACCG 
    TGGTGGTGAA GTACGGCGGC GCGGCGATGA AGTCGCCGGA GCTCCAGGCT 
    TCAGTGATCC GCGACCTGGT CCTCCTCTCG TGCGTCGGCC TCCACCCCGT 
    GCTCGTCCAC GGCGGCGGCC CCGAGATCAA CTCCTGGCTG CTCCGCGTCG 
    GCGTCGAGCC GCAGTTCCGG AACGGCCTCC GCGTCACTGA CGCGCTCACC 
    ATGGAGGTCG TCGAGATGGT GCTCGTCGGC AAGGTCAACA AGCACCTCGT 
    CTCCCTCATC AACCTCGCGG GCGGAACCGC CGTAGGTCTC TGTGGCAAGG 
    ACGCTCGCCT CCTCACCGCG CGCCCCTCCC CGAACGCAGC GGCCCTCGGC 
    TTCGTCGGCG AGGTCTCGCG CGTGGACGCC ACCGTCCTCC ACCCAATCAT 
    CGCCTCCGGT CACATCCCGG TCATCGCCAC TGTGGCCGCC GACGAGACCG 
    GGCAGGCCTA CAACATCAAC GCTGACACGG CGGCCGGCGA GATCGCCGCC 
    GCGGTCGGCG CGGAGAAGCT GTTGCTGCTC ACAGATGTGT CTGGAATTCT 
    GGCCGACCGT AATGACCCCG GGAGTCTGGT GAAAGAGATC GACATTGCTG 
    GGGTGCGGCA GATGGTGGCC GACGGGCAGG TAGCTGGTGG GATGATACCG 
    AAGGTGGAAT GCTGCGTGCG TGCCCTCGCA CAGGGCGTGC ACACTGCAAG 
    CATCATCGAT GGGCGTGTCC CGCACTCGTT GCTGCTCGAG ATTCTCACAG 
    ATGAGGGCAC TGGCACTATG ATCACTGGCT GAGGTGATTC ATCCCGTCGT 
    GGTTTTTGTC ATTCTTTTTG GAGTTGGCCT GGTGTGATAT GATAGATTGA 
    ACTGTGAACC ACAAGTGAAT GGAGAAAATG ACTTGATTTG GCACCACTAT 
    ACCAAGGTTC TAGCTGTGAC TCATGAGGTT TGGAGAAACT GATGGCATGG 
    AGGGCTGGAC TGGTAGAGCT CTGGGTCCTT GCAGACATCA TTCCTCTGTT 
    CTTTCCACCA CCATGGCATG GTCAGAGCAA ATTCCACTTG CATCTAATGG 
    AACGGTGCCT TCTTTTCCGT ATTTAAGTAC TGTATTAGTG GAAACTTTCA 
    GTCTTTCATT GTGCCATTCG TCATTTCTGA TCTGTTGTGT GAGAGAAATT 
    TTGAGAAAAG GGAGGAAAAG CTCTACCCCT TCACTTGGCG TTACAGAATC 
    TATTCCTCAT TATGTTGTCT ATTTACTTTT TGTGCGATAC TGATACGGTA 
    AGCATATCGT AGTGCTGTTT AGTGTC

    Gene models with high sequence identity

    1. AT3G57560.1 [+] show detail - N-acetyl-l-glutamate kinase
      E-value: 2e-97; Score: 353.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Aspartate/glutamate/uridylate kinase 1.4e-86
    superfamily Aspartate/glutamate/uridylate kinase 4e-71
    HMMTigr Acetylglutamate kinase 9.9e-104
    HMMPfam Aspartate/glutamate/uridylate kinase 1.7e-40
    FPrintScan Glutamate 5-kinase 3.2e-07
    FPrintScan Glutamate 5-kinase 3.2e-07
    FPrintScan Glutamate 5-kinase 3.2e-07

    See the detailed result >

    AT3G57560.1

    Model type
    Protein coding
    Short Description
    N-acetyl-l-glutamate kinase
    Curator Summary
    encodes a N-acetylglutamate kinase, involved in arginine biosynthesis
    Computational Description
    N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR