K36504

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36504

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36504

Determination of introduced cDNA(s)

  • J023070O07 - Rice Full-length cDNAs - Original: J023070O07

    full reading [+] show sequence

    Nucleotide sequence: J023070O07 - full reading 
    GGCCGGCCGC CGGCGGCAGC AGCTTCCCGC CGCCGCCGCC GGCGGTAGGC 
    GTCGCCGGCG TGGCGTGCAC GTACATGATC GAGAGGCCGG AGCTCCGGTG 
    GGCGTTCATC CGCAAGGTGT ACGCGATCGT GGCGACGCAG CTGGTGGTGA 
    CCGTCGCCAT CGCCGCCGCC GTCTACTCCG TCCCGGCCAT CCGCCGCTTC 
    TTCCTCGCCC GCACGCCGGC GTCGCTCGCC GCCTTCGTGC TCGTCATCGT 
    CGCCCCCCTC ATCGTTATGC TGCCGACGAT GTTTCTCCGT AAGAAGCATC 
    CGATCAACCT CATCCTTCTA GCATTGTTCA CCATTTGCAT GAGCTGCGCC 
    ATTGGCCTGG GCTGCCTCTC TTCCAAAGCC GGCATTGCTA TAATCGAAGC 
    GGCATCCCTA ACGTTCGGGC TGGTGTTCGG CCTGACGCTC TACACATTCT 
    GGGCGGCCAA GAGAGGCCAT GACTTCAGCT TCCTCCGCCC CTTCTTGGTC 
    GCGGCCTTCC TCGTCCTCGT CCTCTACGGT CTCATCCAGA TGTTGGTGCC 
    AACGGGGAAA GTGGCGACGA CGGTGTACGG GTGCGTGGCG GCGCTGGTGT 
    TCTCCGGCTT CATCATCTAC GACACGGACA ATCTGATCAA GAGGCACGCC 
    TACGATGAGT ACGTCACGGC TGCCATCTCG CTCTACCTTG ACACCGTCAA 
    CATCTTCATT GCCATTTTCA CTGCACTCGA CGCTTCAGAT TCATAGAATA 
    TATCTCTAGA GTTTGTTACT AGTAGTTGTT ACCCTGCTGA AAAGCAGCAG 
    CCAGTAACTA TAACTCTTTA TAGGGAAAAC ATATGTAGTT ATCGTATTGC 
    ATTCCAATGT ATTAGCCATG AATTTGAGGT AAATATGAAC CATTACAGTA 
    ATAATAATAA TGTACGTGGC TT

    Gene models with high sequence identity

    1. AT3G63310.1 [+] show detail - Bax inhibitor-1 family protein
      E-value: 2e-63; Score: 239.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PTHR23291:SF9 1.19999063421924e-86
    HMMPanther Bax inhibitor-1-related 1.19999063421924e-86
    HMMPfam Bax inhibitor-1-related 1.99999999999999e-39

    See the detailed result >

    AT3G63310.1

    Model type
    Protein coding
    Short Description
    Bax inhibitor-1 family protein
    Curator Summary
    Mediates cell elongation in brassinosteroid signaling.
    Computational Description
    BRZ-INSENSITIVE-LONG HYPOCOTYLS 4 (BIL4); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 5145 Blast hits to 5145 proteins in 1455 species: Archae - 0; Bacteria - 2761; Metazoa - 841; Fungi - 142; Plants - 239; Viruses - 82; Other Eukaryotes - 1080 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR