K36530

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36530

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36530

Determination of introduced cDNA(s)

  • J023117O12 - Rice Full-length cDNAs - Original: J023117O12

    full reading [+] show sequence

    Nucleotide sequence: J023117O12 - full reading 
    GGCCTGCCTA CCTGTCCTGT CCGTCCACCT TGCTGTGTTA AATGCGTTTC 
    TAGCGTAGCG TAGCAGATCC AACAAACACC TAGCAGCAGC AGCATTGGTA 
    CGTACTCCTC CTAGTCCTAG CTAGTGAGTG AGCGTGAGGA GCAGTGAGCA 
    TGGCGTCGCC ACAGCTACAG CTGCAGGTAC TAGCGCTGCT GCTGCTGCTC 
    GCCACCACGG CCACGGCCAC GGCGACGCCG ACGCCGACGC TGATATTCCT 
    TTTGGGCGGG CAGTCCAACA TGGGCGGTCG CGGCGGCGCC ACCAACGGGC 
    CGTGGGACGG CGTGGTGCCG CCGGAGTGCG CCCCGTCACC TCGCATCCTC 
    CGGTTGTCCC CTGAGCTCCG GTGGGAGGAA GCGCGGGAGC CCCTCCACGC 
    CGGCATCGAC GTCCACAACG TGCTCGGCGT GGGCCCGGGG ATGTCCTTCG 
    CCCACGCCCT CTTCCGCGCC ATCCCGCCCT CCACCGTCAT CGGCCTCGTC 
    CCCTGCGCCC AGGGAGGCAC GCCCATCGCC AACTGGACCA GGGGCACGGA 
    GCTGTACGAG CGGATGGTGG GGCGCGGCAG GGCGGCCATG GCCACCGCCG 
    GTGCAGGTGC AGGGGCCAGG ATGGGGGCGC TGCTGTGGTA CCAGGGGGAG 
    GCGGACACCA TCCGGCGGGA GGACGCGGAG GTGTACGCCC GGAAGATGGA 
    GGGCATGGTG CGCGACGTCC GGCGAGACCT GGCGTTGCCG GAGCTGCTGG 
    TGATCCAGGT GGGGATCGCG ACGGGGCAGG GCAAGTTCGT CGAGCCCGTC 
    AGGGAGGCCC AGAAGGCGGT CAGGCTTCCT TTTCTCAAGT ACGTCGACGC 
    CAAGGGCCTC CCCATCGCCA ACGACTACAC GCACCTCACC ACCCCGGCGC 
    AGGTCAAGCT CGGCAAATTG CTAGCCAAGG CCTACCTATC CACGCTCTAA 
    TTATATCATT TGCGTTCACT GCTGGCTACT AAGTACTGAT TCATTCCTCA 
    CCTTCCCCTC TATGCAAAAT CTGTCATATG GAGCGCGTGC TGTATGTAGG 
    GGATGAGTAT CTTACCACTT CTTCCTTCAT TCCGGATTAA AATATAATGT 
    TACTGATTTT CTTTTTCCC

    Gene models with high sequence identity

    1. AT4G34215.2 [+] show detail - Domain of unknown function (DUF303)
      E-value: 3e-57; Score: 219.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G34215.2

    Model type
    Protein coding
    Short Description
    Domain of unknown function (DUF303)
    Curator Summary
    Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
    Computational Description
    Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR