K36551

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36551

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36551

Determination of introduced cDNA(s)

  • J013102C12 - Rice Full-length cDNAs - Original: J013102C12

    full reading [+] show sequence

    Nucleotide sequence: J013102C12 - full reading 
    GATTCCACTT CTCTTCTCTC TCGTGGTCGC ATGATCTCAT CAGGAGCGCA 
    GATGCTACGG CGTCCTTGAG AATTGCAGAG AGGCAAAAGA AGAACAAGCA 
    GAGAGCAAGA ACAAGCAGAA GCAGAAGCAA AGAGGCGATG GACGGCGACA 
    CGCTGTCGGC GGCGGCGGCG GAGGACGGGA AGGTGCTGCA CGCGTTCCAG 
    ACGAGCTTCG TGCAGGTGCA GAGCTTGCTG GACCAGAACC GGGTGCTGAT 
    CAACGAGATC AACCAGAACC ACGAGTCCAA GGTCCCCGGC GACCTCTCCC 
    GCAACGTCGG CCTCATCCGC GAGCTCAACA ACAACATCCG CCGCGTCGTC 
    GACCTCTACG CCGACCTCTC CTCCCTCTTC GCCGCCTCCT CCCCCGGCCC 
    CGCCGCCTCC AAGGGCGCCT CCGTCGGCAC CGCCGTCCGC CACGCCGGCC 
    ACAAGCGTGT CAGGTCCACC CACCTCGACT GAACAAGAAC CATTCTCATT 
    TTCTCAATTA ACCACCTCCA ATTCTCCAAT TCCAATTCCA ATTTCGGCTA 
    GCTTAGCTTA AAGATCGAGC TCTTGCTTGC TTGTATATCT AGCTATAATC 
    TATAAATCTA CATATGAGCA ATTAACGCCC CCTCACAACT ACTCCCGATG 
    TTTCATATTA TAAGACTTTC TAACATTTGC CTACATTCAT ATATATGTTA 
    ATGAATCCAG ACATATATGT GTGCCTAGAT TCATTAACAT CTGTATGAAT 
    GTGGGTAATG CTAGAAAGTC TTATAACCTA AAACGTAGGT AGTACAATCA 
    TCTTCGGTTC TTTCTTGTAG CTGTTGTTTC ATCTTGTTGT AGCTGATATG 
    ATGAGCTATT ATATGGATTT TGATGCAACA ATGCCAATAC AAGAGAGTGA 
    GCACTTCTCT GAATTCCC

    Gene models with high sequence identity

    1. AT2G06255.1 [+] show detail - ELF4-like 3
      E-value: 1e-23; Score: 107.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF1313 9.4e-40
    Coil coiled-coil 0

    See the detailed result >

    AT2G06255.1

    Model type
    Protein coding
    Short Description
    ELF4-like 3
    Computational Description
    ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR