K36622

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36622

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36622

Determination of introduced cDNA(s)

  • J033118E11 - Rice Full-length cDNAs - Original: J033118E11

    full reading [+] show sequence

    Nucleotide sequence: J033118E11 - full reading 
    GGAGAGAATT CAAACTGTAC TACGTAGTAG TACTAGCGCT AGCACTAGCG 
    AGCGGTGGTT GAGCGGCGCA TCGCACGCGC CGCCCTTGAC CAGCGACGGC 
    GAGAAGCTCC TCCGCCTCCG CCTCCTCGTC GTCGGGCGCG CGCCCACCGC 
    CGGCGGCGGC TCTCGGCGGC AGCAGGCAGC GGCAGTGGCC TCGATCGGCG 
    GGTTGCGCGG TCGGATCCCC AATCCCCGGG CTGCGCTGCT TCGTGAGAAG 
    GCTGGGTTCT TGCTGTTTTC CCCAGACTTC AAGGAATCTG CAATTTACTA 
    GCGAAAATGG GTGTATCAAG ACCTCCAAGC ACCCCTGCAT CAAAGATTGA 
    GCGCACACCG ATGTCGACCC CAACCCCTGG TGGCAGCACT AGGGTCAAGG 
    AGGAGAAGAT TTTTGTCACA GTGAGGGTGC GACCATTGAG CAAGAAAGAA 
    CTGGCCTTGA AGGATCAGGT GGCATGGGAG TGCGATGATA ACCAGACAAT 
    TTTGTACAAG GGCCCCCCAC AGGATCGGGC TGCACCCACC TCTTACACTT 
    TCGACAAGGT GTTTGGACCA GCTTCCCAGA CAGAAGTGGT GTATGAAGAG 
    GGAGCTAAGG ATGTTGCTAT GTCTGCATTG ACAGGCATTA ATGCCACCAT 
    TTTTGCCTAT GGTCAAACCA GCAGTGGTAA GACATTCACC ATGAGAGGCG 
    TCACAGAGAG TGCTGTAAAT GATATATACA GGCACATAGA AAATACTCCT 
    GAGAGGGACT TTATCATCAA GATATCTGCT ATGGAAATTT ACAATGAGAT 
    TGTGAAGGAT CTTCTACGAC CTGAGTCTAC CAATCTTCGC TTGTTAGATG 
    ATCCTGAGAA AGGAACAATT GTAGAAAAAC TGGAAGAAGA AATTGCCAAG 
    GATAGCCAAC ATCTTAGGCA TCTAATCAGT ATTTGTGAAG AACAAAGACA 
    GGTTGGGGAG ACTGCACTAA ATGACACCAG TTCACGTTCC CACCAGATCA 
    TTAGGCTGAC AGTTGAGAGT AGGCTCCGTG AAGTGTCAGG ATGTGTTAAA 
    TCTTTTGTGG CTAATCTGAA TTTTGTTGAT CTTGCTGGAA GTGAACGAGC 
    TGCACAAACA CATGCAGTTG GCGCAAGACT GAAAGAAGGC TGCCATATAA 
    ATCGCAGCTT ACTGACTCTT ACTACTGTCA TCAGAAAGCT AAGCTCGGAT 
    AAAAGAAGTG GACACATACC CTATCGAGAC TCGAAGTTGA CACGCATTCT 
    CCAGCTTTCT TTGGGTGGAA ATGCAAGAAC AGCCATCATC TGTACCATGA 
    GTCCAGCGCA AACACATGTA GAACAATCTA GAAATACTCT ATTCTTTGCA 
    ACCTGTGCCA AGGAGGTTAC GAATAATGCA AAAGTTAATA TGGTGGTATC 
    AGATAAGCAA TTGGTGAAGC ACCTACAGAT GGAAGTTGCT AGACTCGAAG 
    CTGAGCTGAG AACCCCTGAT CGTGCCTCCT CTTCTGAGAT CATTATAATG 
    GAAAGGGACA GGAAGATTAG ACAGATGGAA AAAGAAATGG AGGAACTCAA 
    GAAGCAAAGA GACAATGCAC AGTTGAAACT TGAAGAATTA CAGAAGAAGA 
    TGGGTGATAA TCAGCCAGGA TGGAATCCTT TTGACTCACC ACAAAGGACA 
    CGGAAATGCC TCACATATTC TGGATCACTA CAGCCAAGTA ACAAAATGAA 
    GATACGGAGC TCGATTAGAC AATCAGCCAC TGCTCCATTT ATGTTAAAGC 
    ATGAAATTCG CAAGCTTGAG CAGCTACAAC AGCAGCTTGA GGTTGAGGCT 
    AACCGAGCTA TTGAAGTACT GCACAAAGAA GTCGAATGCC ATAAACATGG 
    CAATCAAGAT GCAGCAGAAA CTATTGCTAA ACTACAGGCT GAAATCAGGG 
    GGATGCAATC TGTCAGATCT GACAGAGATG TTGACATGAT CACAGATGAA 
    GGAAATGGAT CTGATTTGAA AGAAGAAATT AGTAAACTTC ATATGCAAGA 
    CAATGATATT GCAAAACTTG AGGCTAAACT AGAAAATGTA CAGAGGTCTA 
    TTGATAGATT GGTGATGTCA CTTCCAAATG TTGGCACACA ATGTAACGAG 
    ACTACACCAA AGTCCAACAG AGCAAAGAAG AAGAAGAGGA TGCTTCTTCC 
    ACTGGGCGTG AGCAACATAA ACAGACCAAA TCTGATAAGA GCACCATGCT 
    CTCCCCTCTC TTCTAGTAGG CCTTTAGAGC CAGAAGTTGA GAATAGGGCT 
    CCAGAGGGTG ACACTGTGTC TCATGAAGGT TCAGAAAGGG CTACTCCTAC 
    TAAGAGTGAA GACACTGGAG ATGTATCATC GCGTGATGAA ACCCCACGCT 
    ATAGGCGATC CAGCTCAGTG AACATGAAAA AGATGCAGAA GATGTTCCAA 
    AATGCTGCTG AGGAGAATGT TAGAAATATC CGGGCTTATG TCACTGAACT 
    GAAGGAGAGA GTTGCAAAAC TTCAATACCA AAAGCAGCTG CTTGTCTGTC 
    AGGTCTTGGA GTTGGAATCG AATGAAGGCA AGACAAATGA CATGGAAGAA 
    GATTCAGAGG AAAATGCAGG ATCTCTACAG GATGGTCCTG ATTCATGGGA 
    CAGATTATTT AAGGAGCAGA TGCAGCACAT TATCCAACTG TGGGATCTCT 
    GTCATGTATC AATCATACAC AGGACCCAGT TCTACTTATT ATTCAGGGGG 
    GATAGGGCTG ATCAGATATA TATTGAAGTC GAAGTTAGAA GACTGACATG 
    GTTGCAACAG CATTTTGCTG AGGTGGGCGA TGCAAGTCCT GCAGCTGGTG 
    ATGACTCCAC AATTTCTTTA GCCTCAAGTA TCAAGGCATT GAGGAATGAG 
    CGAGAATTCC TCGCGAGAAG GATGGGCTCA AGGCTGACAG AAGAAGAGCG 
    AGAGCGCCTC TTCATCAAAT GGCAGGTGCC CCTGGAGGCG AAGCAGCGGA 
    AGCTCCAGCT TGTGAACAGG CTCTGGACAG ACCCCAATGA CCAAGCTCAC 
    ATTGATGAGA GCGCCGATAT AGTGGCCAGG CTGGTTGGTT TCTGTGAGGG 
    TGGTAACATC AGCAAGGAGA TGTTTGAGCT CAATTTTGCA GTCCCTGCAA 
    GTAGGAAGCC ATGGCTGATG GGTTGGCAGC CCATTTCAAA CATGATCAGG 
    GAGAAGACAC AACTTTGGTA AGCAGAGATA TGCCCATCTT CCTTGTTAAG 
    ATGAGGTAGA AGGATCATAT AATCTCATAA AAATTTTGGT GCTCTGGACC 
    AAAGGTGAAG TGGCTGAGCT TCTGGGTTGG TCAAGGCCAG GATTGACAGG 
    GGGTGAATTG ATGCAAGCAT GGTGCCAACA TGCTTCAGTC TGTGTAGAAT 
    CTTCTCTTGA ACCTGTATTC TTCTTTCATC ACCAGTGTAG AGAGACTTGG 
    ATGTTCTCAT ATTCTTTATT AAGTAGTGTT AAGAAATGAT TCCGTTCCAA 
    ATTTTGCCCC CAAATTGATG ATCAAAAGTT CGTCTTGCCA TGTGGTTAAA 
    GGCTGAATCA TTTAAAGAAT GCATAGAGAT ATTTCCACTC TTTCTCACAG 
    GAACACATGG AGTTCAGGAA CCAGGATCTC GCGGAGTTAG AAAATATTGT 
    GGTTCTCGCT GTACAACGAG GACCTCTCCT TTTGGCTTGT GCTATTTGTT 
    CCGCTTTCTG GATTGTTCTA GCGTCTTTCT AGTTCCAGAT TCTTCTTTCT 
    TGGCGAGTAA CTTCTCGTCA GACATCTTCC TTTTAGTTTT GTTAGTCAAC 
    CTCGTCTGCA TGAGTTATCA GTGATTTTG

    Gene models with high sequence identity

    1. AT1G18370.1 [+] show detail - ATP binding microtubule motor family protein
      E-value: 0; Score: 999.99

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Kinesin, motor domain 2.1e-132
    ProfileScan Kinesin, motor domain 43.475
    HMMPfam Kinesin, motor domain 2.9e-96
    HMMPfam Protein of unknown function DUF3490 9.2e-75
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Gene3D Kinesin, motor domain 3.7e-104
    HMMPanther KINESIN MOTOR PROTEIN 1-RELATED 0
    HMMPanther KINESIN HEAVY CHAIN 0
    superfamily P-loop containing nucleoside triphosphate hyd 1.2e-103
    FPrintScan Kinesin, motor domain 2.1e-36
    FPrintScan Kinesin, motor domain 2.1e-36
    FPrintScan Kinesin, motor domain 2.1e-36
    FPrintScan Kinesin, motor domain 2.1e-36

    See the detailed result >

    AT1G18370.1

    Model type
    Protein coding
    Short Description
    ATP binding microtubule motor family protein
    Curator Summary
    Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.
    Computational Description
    HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR