K36639

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36639

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36639

Determination of introduced cDNA(s)

J013074D19 - Rice Full-length cDNAs - Original: J013074D19

full reading [+] show sequence

GGCCCCCACT GTCCACTCTC ACACCAAAAC CAGTAAAAAA ATATCGTCAC 
CTTCGCCGGC GAGATGGCCC ACCGCCGCAT CATCCTCCTC CTCGCCGCCG 
CCGCCGTCGC CGCGACCTCC GCCGTCGCCG CCGCGTCCTC CGGCTTCGAC 
GACTCCAACC CGATCCGCTC CGTCACGGAC CACGCCGCCT CCGCGCTCGA 
GTCAACCGTC ATCGCCGCCC TCGGCCGCAC CCGCGACGCC CTCCGCTTCG 
CCCGCTTCGC CGTCAGGCAT GGGAAGAGGT ACGGCGACGC GGCGGAGGTG 
CAGCGGCGGT TCCGGATCTT CTCCGAGAGC CTCGAGCTCG TCCGCTCCAC 
CAACCGGAGG GGCCTCCCCT ACCGCCTCGG CATCAACCGT TTCGCGGACA 
TGAGCTGGGA GGAGTTCCAG GCGAGCCGGC TCGGCGCGGC GCAGAACTGC 
TCGGCGACGC TCGCCGGCAA CCACCGGATG CGCGACGCCG CCGCTCTCCC 
GGAGACCAAA GACTGGAGGG AGGATGGGAT CGTGAGCCCC GTGAAAGACC 
AGGGTCACTG TGGTTCCTGT TGGACCTTCA GCACCACTGG TTCTCTTGAG 
GCAGCATATA CTCAGGCCAC TGGGAAGCCT GTCTCTCTTT CTGAGCAGCA 
GCTGGTTGAT TGTGCTACTG CATACAATAA TTTCGGATGC AGTGGAGGCC 
TACCATCTCA GGCCTTTGAG TACATCAAAT ACAATGGTGG CCTTGACACT 
GAAGAGGCTT ACCCTTACAC GGGTGTCAAT GGCATCTGTC ATTACAAGCC 
TGAAAACGTT GGAGTCAAGG TTTTGGACTC CGTTAACATC ACCCTGGGTG 
CTGAGGATGA GCTGAAGAAT GCTGTTGGAC TTGTTCGTCC AGTTAGTGTT 
GCCTTTCAGG TGATCAACGG TTTCAGGATG TACAAGAGTG GAGTTTACAC 
AAGTGACCAT TGTGGAACTT CTCCAATGGA TGTGAACCAC GCTGTTCTGG 
CCGTTGGCTA TGGTGTCGAA AATGGCGTTC CCTACTGGCT CATCAAGAAC 
TCATGGGGTG CAGACTGGGG TGACAATGGT TACTTCAAGA TGGAAATGGG 
CAAGAACATG TGCGGTATTG CTACTTGCGC ATCCTACCCT ATTGTTGCAT 
GAGGTGCCCA CGGATTAGTT CCATTGTGTC AATTTAGTTG GCCTCAATAA 
TATATTTTTC TGTCCAAGGA TGAAGATGGG TATACAGAAA CTGAAACTTT 
CTTGTGAATA TAAGATCATA AGGACATGAA TTAGCCCAGT GCATGTAATC 
TTCTCCTGTA TGGTTGTGTA GGTAATCCAG CAATTGGGGT TTCAGAGTAC 
TCATTACATG GCTGTAAATT CCTATTTATG CGACAGAATG GCCTATTCAT 
ATTTCATAGT GCAGTTACGA AAATTCCGGG TCATGTGTAC ATTATTATTC 
GAGTGATTTT ACAGCCATCT ATTATAGTTT CTGGTT

Gene models with high sequence identity

AT5G60360.1 [+] show detail - aleurain-like protease
E-value: 4e-149; Score: 525.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	CYSTEINE PROTEASE	2.7e-278
HMMPanther	Peptidase C1A, papain	2.7e-278
Gene3D	no description	8.4e-107
superfamily	Cysteine proteinases	4.2e-110
HMMPfam	Peptidase C1A, papain C-terminal	7.7e-79
HMMPfam	Proteinase inhibitor I29, cathepsin propeptide	8.4e-12
FPrintScan	Peptidase C1A, papain C-terminal	2.2e-10
FPrintScan	Peptidase C1A, papain C-terminal	2.2e-10
FPrintScan	Peptidase C1A, papain C-terminal	2.2e-10
HMMSmart	Proteinase inhibitor I29, cathepsin propeptide	3.3e-19
HMMSmart	Peptidase C1A, papain C-terminal	4e-113
PatternScan	Peptidase, cysteine peptidase active site	0
PatternScan	Peptidase, cysteine peptidase active site	0
PatternScan	Peptidase, cysteine peptidase active site	0

See the detailed result >

AT5G60360.1

Model type: Protein coding
Short Description: aleurain-like protease
Curator Summary: Encodes a senescence-associated thiol protease.
Computational Description: aleurain-like protease (ALP); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: response to ethylene stimulus, proteolysis, aging; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G45310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR