K36706

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36706

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36706

Determination of introduced cDNA(s)

  • J013036B06 - Rice Full-length cDNAs - Original: J013036B06

    full reading [+] show sequence

    Nucleotide sequence: J013036B06 - full reading 
    GGGGCGGAGA GACGGGAGAG AGAGGAGAGG AGTCGAACTA GGGTTAGTGA 
    GGTGAAGGGG GGCGATTTTG CTCATCGCCC TCCGCCTAGA TCGAATCCGA 
    ATCCCGCCTC CTCCTCCTCC TCCTCCTCCC CCCGCGCCGA TCTTGCCCCG 
    CTCCCTCGCC GCAGCTGCGG GCTTGCCCTA GCCCGCCGCA TCGCCGACGT 
    ACTACGCCCG CTCGGCTCCA GGCTCCAGAT CCGGCCTCCA GGGCGTGCCC 
    GCTGCTGGAC GGCGCTCTCC CGCGTCCGTG GCTACCTCCT CCTCCGGGTT 
    TGCGTTGCCG TCGCCGAAGC GATCCGTTGG TGGATTGTGT GTAGCTCTGT 
    AACAAAGGAT CTTGGTCCAT AGGAGTGAAC CAGAAGGTAC AAAACTTCTT 
    GGCTATTATG ACATCGGTGG GTCTAGTAGA TTCTTCATCA GGTTTCCCGG 
    AAACGAGTAC TAGTGGAGCC ACTGATCGTC TGACAGATGA TATCAGCGAG 
    ATGAGCATAA GAGATAAGGA AGTTGAAGCT GTAGTGGTCA GTGGCAATAG 
    TATGGACATA GGTCACACTA TTGTGACAAC TGTTGGTGGA AGAAATGGGC 
    AGCCAAAGCA GACAATTAGT TACATCGCAG AGCGTGCTGT TGGGCGTGGT 
    TCATTTGGAG TTGTCTTCCA GGCTAAGTGT CTAGAAACTG GTGAGAGAGT 
    TGCTGTAAAG AAAGTTCTTC AAGATGCGAG ATACAAGAAC CGGGAGCTGC 
    AAACGATGCA AGTTCTCGAT CACCCAAATG TTGCATGCTT GAAGCATTAC 
    TTTTGCTCGA CTACTGCGAA GGAGGAGCTA TACCTCAACT TGGTTCTTGA 
    ATATGTGCCA GAAACTGTTC ATCGTGTTAT TAGACATTAC AATAAGATGA 
    GCCAACGCAT GCCATTGATT TATGTTAAAC TTTATATGTA CCAGATTTGT 
    AGGGCTTTGG CATACATTCA TAACTGTGTG GGAGTATGCC ACAGAGATAT 
    AAAGCCACAG AATATATTGG TGAATCCACA TAATCATCAG TTGAAATTGT 
    GTGACTTTGG CAGTGCAAAA GTCCTGGTGA AAGGGGAACC AAATATTTCA 
    TATATCTGTT CTAGATACTA CAGAGCCCCA GAACTCATAT TTGGGGCTAC 
    AGAGTACACG ACAGCTATTG ATGTGTGGTC TGCTGGCTGT GTTCTTGCTG 
    AACTACTTCT AGGGCAGCCT GTTTTTCCTG GTGACAGTGG CGTCGACCAA 
    CTTGTTGAAA TTATCAAGGT ACTGGGTACT CCAACAAGGG AAGAAATCAA 
    ACATATGAAT CCGAACTACA CTGAGTTTAA GTTCCCCCAA ATCAAAGCTC 
    ACCCATGGCA CAAGATCTTT CATAAAAGAA TGCCATCTGA AGCTGTAGAT 
    CTTGTGTCTC GGCTTCTGCA GTACTCACCA CACCTCCGGT GCAGTGCATT 
    GGAGGTGTTA ATTCATCCAT TCTTCGATGA ACTACGAGAT CCAAATGCTC 
    GCTTACCAAA TGGCCGTACT CTTCCCCCAC TATTCAATTT CAAGCCTCGT 
    GAGCTGAAAG GAGCATCAAT GGAATTTCTT GTGAAGTTGG TTCCACAGCA 
    TGCTAAGAAG CAATGTGCCT TCTTAGGATT ATGAGCAGAC AGTTCATACA 
    CTAATCGGGT ATTACGTTGG TCTACTTGGT TCCGTAGAAC AGCATGGCCT 
    GCAGTATTAT TGAATGGGCC CTAATTTTGT TCTACGTGCA CCCTGCTTGG 
    GCATGCCTTC TACCATCATA TTCTGTAAAG CAGATGAAGA CATGGAGTGA 
    GTGGTTATTG ATTGGGGCTT GTATATTGGT CTGCCCTTGA CTTGAGAACT 
    TTATTCACTC TGCTGTATCA AGCAAGAAAG AACACGTATG TATGCTTGAG 
    CCATATTTCA TTCCAGAGCC TCTATCAGGT TTCACCGACC ATCAGATTTA 
    AGTCTTCCAG TTTGTAGGGC TAAGCCAAAA AAGTTCTATG TGTGAAGAGT 
    TGGAGACATC TGTTTGGTTA CAAGCTATTT GATTGTATTT GATCATTCTT 
    TTGTATTAAC ACTCTGATAA ACTTACATGA GTTAATTCTA TTGTTATGTG 
    ATATAGTTGT GTGCCACTTT TAAACACC

    Gene models with high sequence identity

    1. AT5G26751.1 [+] show detail - shaggy-related kinase 11
      E-value: 0; Score: 647.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 43.679
    HMMPfam Serine/threonine-protein kinase-like domain 1.4e-63
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMSmart Serine/threonine-protein kinase domain 8.8e-87
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.2e-11
    Gene3D no description 1.6e-21
    Gene3D no description 3.1e-66
    superfamily Protein kinase-like domain 7.6e-83
    HMMPanther GLYCOGEN SYNTHASE KINASE 3-RELATED (GSK3) (CM 6.1e-161
    HMMPanther CDC2, MAP KINASE-RELATED 6.1e-161

    See the detailed result >

    AT5G26751.1

    Model type
    Protein coding
    Short Description
    shaggy-related kinase 11
    Curator Summary
    encodes a SHAGGY-related kinase involved in meristem organization.
    Computational Description
    shaggy-related kinase 11 (SK 11); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: inflorescence meristem, whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR