K36746

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36746

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36746

Determination of introduced cDNA(s)

  • J033089L20 - Rice Full-length cDNAs - Original: J033089L20

    full reading [+] show sequence

    Nucleotide sequence: J033089L20 - full reading 
    GAGAGTTTTC AGGCAGCTTG TTGTTTCTCT GCCTCGAGAG AAAAGAAAAA 
    AAAAGAGAAA TCTTGGGAGT GCCAAAGCGG AGGAGAAAGG CTCGTACTTT 
    GAAGGGGAGG GAGGAGCGCA ATGCAGCGCG GATCTCTCGG CGTGCTGCGG 
    CTGCGGCTGT GGCTGTGGCT GCTCGCGGTC TCCGCATCAA CCGCTGTTCT 
    TGCGGCGGAT CCTAGCAAAG AGCCATTCAC CATCCGCATA AGCTGTGGGA 
    GTTTTGATGA TATCCGGACA GCTCCTACCA ACACATTGTG GTACAGAGAC 
    TTTGGTTATA CTGGTGGCAG ATTTGCAAAT GCTACACGGC CGAGCTTCAT 
    AATTCCTCCG CTGAAAACGC TCCGGCATTT CCCTCTGTCT GATGGTCCTG 
    AAAATTGCTA CTACATCAAC AATGTTCCCA ATGGGCACTA TCAAGTTAGG 
    CTTTTCTTTG CTCTTGTGGC TGATCCTAAT CTTGACAGCG AGCCGATTTT 
    CGATGTTTCC GTCGAGGGTA CTCTATTTAG TTCTTTGCTG TTGGGTTGGA 
    GCAGTGAGGA TGAGAAGACA TTTGCAGAAG CTTTGGTTTT TGTCCAGGAC 
    TCAAGCCTGT CAATTTGCTT CCACAGCACT GGTCATGGTG ATCCATCGAT 
    ACTTTCTATC GAAGTTCTCC AAATAGATGA CAATGCCTAT AAATTTGGTC 
    CTTCATGGGG GAAAGGTACA ATACTTAGAA CTGCCAAAAG GTTGACATGT 
    GGTTCTGGCA AACCAGCATT CGACGAAGAT CTAAATGGTA TTCACTGGGG 
    TGGGGACAGA TTCTGGTTAG GGGTGAAAAC TTTGTCTTCC AGTTCTGACG 
    ACCAGCCGAT ATCAACTGAG AACGTTATAG CAGAAACATT ACTTGCACCA 
    AATTTTTATC CTCAAAGCAT CTACCAGTCT GCTATTGTGG GTACTGACAG 
    GCAACCAAGC CTATCCTTTG AAATGGATGT TACTCCAAAC AGGAATTATT 
    CTGTGTGGCT TCACTTTGCA GAGATTGAGA ATGGAATAAC TGCGGAAGAG 
    GAAAGGGTGT TTGATGTACT TATCAATGGG GATACTGCAT TCAAGGATAT 
    TGATATAATT CGCATGGCAG GAGAACGTTT TACTGCCCTT GTTCTGAATA 
    AAACTATTGT TGTCACTGGG ACAACACTAA CAATTGTCTT GCAGCCTCTT 
    AAAGGAACAC GTGCCACTAT TAGTGCTATT GAGGTCTTTG AGATCATTCT 
    GGCCGAAAAG AAAACTTTAA CTCAAGAAGT GAGCGCATTG CGTACTGTGA 
    AGGGTTCGCT TGGTCTTCCT CTTCGATTGG GCTGGAACGG TGACCCCTGT 
    GTTCCTCAAC AACATCCATG GAGTGGAGTT GAATGCCAGT TTGATGATAT 
    CAAAGGCCAT TGGGTCATTG ATGGGCTAGG TCTTGACAAC CAAGGTTTGA 
    GAGGATTTAT ACCTTCTGAC ATATCTAAGC TACAACATCT ACAAAGCATA 
    AACTTGAGTG GTAATAGCAT AAAGGGCAAC ATTCCTGTCA CCTTGGGTAC 
    TATATCAGGG CTGCAAGTGC TAGATCTGTC GTACAACGAA CTTAATGGTT 
    CTATTCCAGA TAGCCTTGGT CAGCTGGCAT CGTTACAGAT ACTGAATCTG 
    AATGGCAATT ATCTTTCTGG AAGGGTACCA GCCAGCCTTG GAGGAAGACC 
    TCTACACAGA GCTAGATTTA ACTTCACGGA CAATGCTGGA CTTTGTGGAA 
    TTCCCGGTTT ACATGAATGC GGCCCGCATT TATCTGTGGC TGCAAAGATT 
    GGTATGGCTT TTGGGGTACT GGTAGCTATC CTATTTCTAG TTGTATTTGC 
    GGCATGCTGG TGGAAGAGAA GACAGAACAT TCGCCGTGCG CAGAAATTAG 
    CTGCAGCAAG GGAAGCTCCT TATGCAAAGT CTCGAACACA ATTTACACGG 
    GACATGCAAA TGGCGAAGCA TCACCGCCCA CATGAAAGCT CTCGGAGCGG 
    CAACGATGAA AGCACTCCAC ATTTGCTTCC TTCCTAGTTA ATTGTTAGCT 
    ATGGTGATTT GTTGTTTGCT CAGTTGATTC TGCTATCAGG TTGAGTTGCA 
    AAACAAATTG TACATACTAG GTCATGTATG GTGTATAGAC ACTCGTTTTT 
    GGCTCCAACG TTTATGGTAC AGGAGCATTA TCAGTTGAGA GAAAGGAATG 
    ATCCAGATCA GGTTGTCCTA TTGCTTCTGA ATTCTGATGG ACCAGGTGGT 
    GTACTGACTG AATTGCAACA TCTTATGCTT GTGCAAATTA GCAGCCAGAT 
    TATCTCCTGT ACTACTTTTA AGTTTGCCAA ATGTAAATTC AGGGGAGCAC 
    CTATTTACTG TTATATAAAC CTGAAATCTC ACCTGGTCTG TCAATCTGTA 
    AATGTTGTTT TTTTTTAGTT TCAATTGACA GTAATTTATT TCGAGTGGCT

    Gene models with high sequence identity

    1. AT1G28340.1 [+] show detail - receptor like protein 4
      E-value: 0; Score: 761.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 3.7e-27
    superfamily L domain-like 1.8e-28
    HMMPfam Di-glucose binding within endoplasmic reticulum 1.4e-18
    HMMPfam Leucine-rich repeat 0.22
    HMMPfam Leucine-rich repeat 0.022
    HMMPfam Leucine-rich repeat 0.7
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 4e-33

    See the detailed result >

    AT1G28340.1

    Model type
    Protein coding
    Short Description
    receptor like protein 4
    Computational Description
    receptor like protein 4 (RLP4); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Leucine-rich repeat domain (TAIR:AT1G25570.1); Has 80698 Blast hits to 16677 proteins in 704 species: Archae - 13; Bacteria - 1525; Metazoa - 2886; Fungi - 292; Plants - 72469; Viruses - 0; Other Eukaryotes - 3513 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR