K36810

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36810

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36810

Determination of introduced cDNA(s)

  • J023077C23 - Rice Full-length cDNAs - Original: J023077C23

    full reading [+] show sequence

    Nucleotide sequence: J023077C23 - full reading
    GCCTTTTCTC CCCGTCCCCC AAATTCGCAT CTCTACCCTC GCCGCCGGCG 
    GCCAAGCGCC ACCGCCGACC ACCGCCGTCC CCCGCGACCT CGCCGTCGTC
    GACCACGACG AGCGGTGGCC GCCGCCGCCG CCGCCCTCCT CGAGTTCGAC
    CCCGTTCATC TCATCCGTCG TCCTCCGCGA GATAACCCTC CATCGCTGTC
    TCGGGCGATG TCGAAGCAGC TGGTGTCGCG GCTGCTGGGG ATGTTCCGCT
    CGCGGGCGCA GGTGGGCGCC GACAAGTTCG GCAACCGCTA CTTCACCCGC
    GTCGAGGAGG TCGACGGCGT CATGAAGGAG AAACGGTGGG TGGAGTTCAA
    GGGGAGCGAC CAGGATCCGA CCACTGTTCC AGTTGAGTGG ATTTGCTGGT
    TGAATGGACA AAGGAAGAAA GCTCCGACAC CAGAGGAGTT GGCTGAGCTG
    GAAGCAAGGC GTGAACGTGT CAAGCAAAAT ATTGAATTGC TCAAAAAGAA
    AGAAGAGGAA AAGAAGACCG GTGTCCGACC AGTCAAGACG GTTGGGAAGT
    TTGAATCTCC AAATCTCAAA AGTTTTATTC AGCAGTTTCC TGATACTTCG
    CTAGATCAGA GAAAAGGACA TGATGAGGTA TCTAGATCAA AGGATGGAAC
    TGATACAGAG GATGCCACCA TAGATACTGA CAGGTCTTCT GAACCGACAG
    GAACTGGTGC TACCTTCAAA CCAGGGACAT GGCAGCCACC AACTTGAATT
    ACAACAAACA TATAATTGTA GCAGGTGAAA TGGTGCTGCA GTCAGCATCA
    GCATTTTCCT TTGAGAGTGT ACTATCTTCC AGTTATTTGA TGAAGAAATG
    GAGATTTATT TTTACTGTGA TTACCACTGT ACACTCCGGG AGTTACATCA
    ACAAATGCAG TATCCGGATG ACAACAGATA TATACTTACC AATCTTATCA
    AATACATGAT CATTCATGTG CCTGACTAAT TAGTTTTGTT ATTGAGAAAT
    ATGG

    Gene models with high sequence identity

    1. AT4G26965.1 [+] show detail - NADH:ubiquinone oxidoreductase, 17.2kDa subunit
      E-value: 2e-36; Score: 149.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0.0000018
    HMMPfam NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0.0000000000000046
    Coil coiled-coil 0

    See the detailed result >

    AT4G26965.1

    Model type
    Protein coding
    Short Description
    NADH:ubiquinone oxidoreductase, 17.2kDa subunit
    Computational Description
    NADH:ubiquinone oxidoreductase, 17.2kDa subunit; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 317 Blast hits to 317 proteins in 96 species: Archae - 0; Bacteria - 24; Metazoa - 85; Fungi - 52; Plants - 37; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR