K37021

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37021

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37021

Determination of introduced cDNA(s)

  • J023084L14 - Rice Full-length cDNAs - Original: J023084L14

    full reading [+] show sequence

    Nucleotide sequence: J023084L14 - full reading 
    GTTGTCTCGT CAACAGATTT CATCGCCCGC GGCCACCGGC GGCCGGCGAA 
    CGCCTCCGTC GCGGCCGGCG CAGGCTGGGG AATTCCACCG GCGGGTTCGC 
    CCATGGCCTC CCCTCGCGAA CCGAGATCCG GGAGCGCTGC ACCGCCGAAA 
    GGGAAGAAGG CGGCGGCGGC GATGGCGGCG CCTCCCAATT CACCGATTGG 
    GTGGTGGCGC GAGGTGAGAG CACGCTTGTG GCTGCACACG GTGGAAGTAT 
    GTCCCCCAGA CCAATGGCTT GTTTGGCGCC GCTCGGCTCC GCCGTGCCGC 
    CGCCACCGCC TCGTTTTGCA GAGCCGGCTG GCCCGCCCTG GAATTCAACA 
    GGGATGGAAA ATATAAGGGA TCAACACCAT CATTTCAATA CAGGAGAGAA 
    ATCCTTTTTT TTTAAAGCAG AGAGATGAGT AGATCTTAGC TCCTTATGAT 
    ACTACATCCA AGCTAATTTT TTTATAACCA ACCAGATATT TTATATTGTA 
    GTTGCTTGGT AAAACGCAAT CAGCATTACA CACAGAGCTA GGATTGGTAA 
    TAGAAGATAG ACTTTAATCC CACACCAACA CTTTCATCTA AACTCCTCCC 
    CTTCCTCAAG ACTCTAAGTG GCAAAACAGT CTGTATATTA TTTTCTTGGC 
    ATCTCATACG GAACAATTTG TTAGTAAAAC TTTCTCCACA GACCGACTGC 
    CACTGCCTGC TTTGATGCAT CGGAAGCCAA ACCGCTGGAA TTTCACGGTG 
    ATTTCCACCT ATTCTGCTAG GTGGAGTGTA CCTACCTCCG CTCTCCAGCT 
    GTTATAAGAT TTGGTTGGTC GTCTCTTTGG TCAACCCGGC TAATAAAGCC 
    CTCCAGCTGT TGTTTGTGTG AGAACGTGGG ATGCATACAA GATACGGAGT 
    AATTCTTTAC TCAAAGTTGA AAAAACCTCT CCTTTTTTCT TTGTTTGAAG 
    AGGTGGAAGT CAACTTTCTT GCACATCCAT TTGTGGTTTA CTCCCATTTC 
    CCTCTGTTTG AATCTGGCTC TCCTCCTAGT TTCTCTCTGA AAGCAGCCTT 
    GCATTTGATC AGCAAGAAGA AAGATCAAGG GCCTCTTCTT CTAGGAGTGA 
    GCTGCAGTTC TGATCTTACT ACTAGTCAGG TGAATGGATT ATTGAGTTTC 
    AAGCTGTAAT GGTCATTTGA AGAAAACAGT ATATTTTGAA AAAAAGGGAA 
    ATAGGTTTGT ACATTGACCA ACATGGCTAC ACTACCAATA GCCACCGGCA 
    TTGGGTGGGT AGTTTGTCCT ATCATCAAGC TTATCTTTGA GAAGGTCCAA 
    TCTTATACAT CAACCCAGTA CAAGTGGCAA TCTGACTTGG AGGATGATCT 
    AAAAAAGATC GAATCCACTT TGATAAAAAT CCAATTGGTG CTGGGTGCTG 
    CTGAAAGGTC GCAAATGCTA GATTGCAACC AAGAAGCTCT ACTTTGCCAA 
    AATGAAAGAT TCTGCCTATG ATGCCGACGA CGTCATGGAT GAATTTGATT 
    ACCTGATTCT GAAGGCAAAT GCTCAGCAGA AGAGCAAGCT AAGTAGCTTG 
    GCCTCCAGTT CTCTTGCCAT AGGAAAGCGT TTGGTTGGCC AAGACAAGTT 
    CAGATCCAAG TTAAGGAGGG TCCTCAATAG CCTGATTAGA GTAAAAGAAT 
    GTGCTGACAT GCTCATCAAA GTGATTGGGG CTGAAAACTC TAATTCATAT 
    ATGCCTCCTC AGCCACTTCA ATGGCGTGTC ACCAGCTCAA TTTCTCCTGG 
    CCAAATTATC ATTGGCCGAC AATGAGCAGG ATGATCTAGT GCACCGACTT 
    CTGAGAGAAG CTGATGGACC AGAGCCAAGC AGAGGACTAA CAATATCACC 
    AACACCATCT ATAATTACCA TAGTTGGCAG TGGTGGCATT GGGAAAACTG 
    CATTAGCTCA GCTTATTTAC AATGACAGAA GAATAGTCAG TGGTTTTGAT 
    CTGAGGACAT GGATATATGT TTCAAATATC TTCAATAAGG TCAAAATCAC 
    CAAAGAGATT TTGAAATCAA TTGATAGAAA CAGTGATATA ACAAATTTCA 
    GTTTTAACAT GCTCCAGGAA GATCTTAAGA ACAAGTTAAC AGCAAAGAAG 
    TTTCTACTTG TGCTAGATGA TGTGTGGTAT GATGAAAAGA TTGGTGAGCT 
    TACAAATGCT GATAGATGGA GAGAATTGTT TGCTCCTCTA TGCTATGGAG 
    CTAAAGGAAG CAAAATTCTT GTTACTGCTC GAACAAATAT TGTTTCAAGG 
    ATTTTGGGTT GCCCAGCACC ATTCCATTTG GAGGGTCTGA AGGGTGAAGA 
    TAGTTGGAAC CTCTTCAGGA TCTGCGCATT TGGCGCTGAA GATCCAGGAA 
    ATTATCCAGA ACTAGAGTCT ATCGGTGAAT GTATTGTCCA AAAGTTGAAT 
    GGCTCAGCAT TAGTCATAAA GGTTGTTGGT GCACATTTGA ATGCTAACCT 
    CAACGTTGAA GAGTGGACAC GAGTTATGAA AAGTAGTTCA TCAAACAAGG 
    AAGACATTAT GCAAATTTTG CGTCTGAGCT ATGAATGCTT GCCAGGTCAC 
    CTCCAGCAAT GTTTTACTTT TTGCAGCCTG TTCCCCAAAG GCTATTCTCT 
    TGAGCCTGAC TTGTTGGTGA ATATGTGGAT AGCCCATAAA TTTGTTCATG 
    GTCATATGGG CACATATGAA AGTATGAGAG AAACTGGTAG AAGTTATTTC 
    AATGAACTAT TATCTAGATC ATTTTTTCAG C

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 5e-45; Score: 180.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam NB-ARC 2e-60
    FPrintScan Disease resistance protein 0.0000000000057
    FPrintScan Disease resistance protein 0.0000000000057
    FPrintScan Disease resistance protein 0.0000000000057
    superfamily P-loop containing nucleoside triphosphate hyd 0.000000015

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR