K37031

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37031

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37031

Determination of introduced cDNA(s)

J013074E12 - Rice Full-length cDNAs - Original: J013074E12

full reading [+] show sequence

GATGTCGCGG CGACGAGGTG AGCGCACGGG CGCACAGCGG AGGCGCCGAT 
CTCTCTCTCC CTCCCAGAAC CCGCCATGGG GAGCAGGAAG AAGGCGAAGC 
CGAGCAGGAG CAGGAAGAAG GCGAAGCCGA GCCCCGACCA GGCCGTGGCC 
CTCGACTACG TCCGCGCCTG GGGCATCCCG CTGCCTCCGC GCCGCCGCCG 
GAGCCCTCGG CTGCCGATGC CGCCGGGGAC GACTTCCTGC CGCACCAGGC 
CGCGCGCATG GCCTCTGGAG GCGGAGGGAG CGTGCTGTTC GAGCTCCACT 
CCCACTCCAA CCACAGCGAC GGGTTCCTCT CCCCCTCCGA GCTCGTGGAG 
CGCGCCCACC GCAACGGAGT GAAAGTACTT GCCCTGACAG ATCATGATAC 
CATGGCTGGT ATACCTGAAG CTGTGTCAGC GGCTCACAGA TTTGGCATGA 
GAATAATCCC AGGAGTTGAA ATCAGTGCAC TATATTCTCC AAAGGAAATC 
GCTGGTACTG GTGAGCATGT TCATATTCTT GCATACTATG GTATGTGTGG 
ACCTTCAAGG TTTGATGATC TGGAAAGGAT GCTATCAAAC ATTAGAGATG 
GGCGGTACTT GCGTGCAAGG AATATGCTGG CAAAGCTAGA TAGACTAAAG 
GTGCCAATAA AGTGGGAACA TGTAACTAAA ATTGCTGGTG AGGGAGTAGC 
ACCTGGCAGA TTGCATATAG CAAGGGCTAT GGTTGAAATG GGTCATATAG 
AGAACATTAG GCAAGCATTC AACAAGTACA TTGGTGATGA TGGCCCTGCA 
TATGCCACAG GAAGTGAACC ATTCGCTGAG ACTGTGGTGC AGTTGATTAA 
TCGTACAGGG GGTATATCTG CATTAGCTCA TCCATGGGCA TTGAAGAACC 
CAGATGCAGT CATCCGAGCA TTGAAAGGTG CTGGCCTTAA TGCTCTGGAA 
GTCTACAGAA GTGACGGAAA AGTTGATGGA TTTAGTGAAT TAGCTGAGAA 
GTATGACCTT TTGAAGATCG GAGGTTCAGA TTTCCATGGA AGAGGTGGAA 
AGGATGAATC TGATATTGGA ACAGTTAAGC TTGCTATTAC TACTTTGTGT 
TCCTTCTTGA AGATGGCTCG GCCTATCTGG TGTAGTGCCA TGAAAGACAT 
TCTACTGAAG TTTGCAGAGG AACCATCTAC GACTAATCTG GGAAAGATGG 
TTTTGTTTGG AGAACTCATT AATTTTAATG GTTTTTCATC AACGGGTTCT 
GGTATGGATA TTGTTAATCT GTGCTTATCT TCCTGGTTAA GTAACAATGG 
CATGGAAGAA GTGGAACTTG AGGAGGTAAG ATTGAAGCTT GCCCATTGCG 
TACGTAAAAG ATAATCTCAA ATGCATGACT ACCTTGAACA ATGGGTGTTC 
CCTTTATCTG GAATGTGTTT TGC

Gene models with high sequence identity

AT2G13840.1 [+] show detail - Polymerase/histidinol phosphatase-like
E-value: 1e-119; Score: 426.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Polymerase/histidinol phosphatase, N-terminal	2.1e-23
HMMPfam	PHP, C-terminal	6.5e-20
superfamily	Polymerase/histidinol phosphatase-like	4.7e-33
Gene3D	no description	5e-06

See the detailed result >

AT2G13840.1

Model type: Protein coding
Short Description: Polymerase/histidinol phosphatase-like
Computational Description: Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink).
Link: InterPro Scan - TAIR