K37120

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37120

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37120

Determination of introduced cDNA(s)

  • J013105F11 - Rice Full-length cDNAs - Original: J013105F11

    full reading [+] show sequence

    Nucleotide sequence: J013105F11 - full reading 
    TTTACGGCGT GACGGCCGGA GACAGCAGCA GCAAGGCACA CCTGCAGCCT 
    GCGCTGGTGG TTCTCTACTC CCTGGCCCTG TTCCAGGGCG TCCTCTTCTA 
    CTACAGGGCC ATCTCTGCTT GGGAAGAACA GAAGCTAGTG AAAGATGTGG 
    CCGACAAATA CATGTTTGAT ACAGTGTCGC GCAGTTCAGT TTCGGACTAT 
    TTACATGAGA TCAAGGTCGG ATGTGAGAAT GACCCGTCCT TTGCCAGAGG 
    GAGGAACCTG ATCACATACG CTGTCAAGCT GATGGAATCC ACATCACCGG 
    ATGGGTACCT TTCAGGTGCA CGGATTCTTG ATACACTCAT CAAGTTTAAT 
    AGAGATGATG CATCGGGGAG CGAATTACCG GGGCAGAGTA TGCAGATATA 
    CAATATGATT GGATCTGCAT CCTCCAGTCC CATACTCCAC AACTTAGTTC 
    AGATGCTGGA TTTCAAAAGT GCATATGATG GAGAGATCAG GTTGCGAGCC 
    GCAAGGATTG TTGAGCACTT TGCTGGTGAG GTCCGTTTAG ACAAAATCCT 
    GCAGGGGATT CGATGTGTAT CTTCCTTGCT TGAACTCGAG CAGAAAGGAT 
    TTCAGAATGA CCACCATAGT TCTTTCCAAG AAGACGACGG CGACCAACTT 
    TCTTTTGAAG AAGAGGATGA TCACCAGATT TCTGTCAAAG AAAAGGATTA 
    TTACCCCAAA GATTATAAAC AGATGCAACT TACAGGCATG CAGATCCTTT 
    TAAAGCTCTC CTACGACAAG AACAACTTGT TCCTCATGAG CAACACAGAT 
    GATCCGGCCT TGATCAACAA GATTGTGGCA CTTATAACGT CCAAGGGATC 
    ACTTCACAAA AAACAACATA ACGAATGGTC CTGTATGGCA GAGCTCGGGG 
    TGAAGATACT AAGCCGATTT ATGCGATTTA TGTATGGCCC TACAAAATCA 
    AACAATATTC TGTGGCATGA AATATCAACA AGCAGCAAAG CAATCGGCAC 
    CTTGGAGAGT ATTCTTGAGT GTGACCAATG TGACTCTGTG CTGAAGAAAC 
    ACGCCATAAG GATTCTCAAA AGGATATTCA TGGATACATC TTCGGCTATG 
    GGTGAAGGAG ACAGAGAAAG GTTCATTGGC TCCTTGATGG ACATGTCTCT 
    TCACAACAGT AATGGTGACT TTCAAAATCT GGCAGGTGTA GATCTGGCGC 
    TCAAGAAACA AGGGTTAAGC ATTCTCAAAG AAATATACTT GAATCCATCT 
    TCGATTATGG GCGAAGGAGA CAGAGAAAGG TTCATCGGCT CCCTGATGGA 
    CATGTTTCTT GACAACAGTA AGGGCGACTT TGGAAATCTG CCAGGTGAAG 
    ATCTGGACCT CAAGAAACAA GAGTTAAGTA TTCTCAAAGA AATATGCATG 
    GATCCATCTT CGTTTATGGG CGAAGGTGAC AGAGAAAAAT TCATCGGCAC 
    CCTGATGGAC ATGTTTCTTC ACAACAGCAA GGGCGACTTG TTTGAAAAAC 
    TAGCAGGTGA TGATCTGGTG CAGATATGTA GAAGAAGTGG AAGCAGTGCC 
    ACGATCATAT TGAGGAAATA TGGTCATGAT ATTGTTGATT GTATTGCTGA 
    TACTCGTTCA AGCGTATATA GCAGCATGCA CAGAAAAATT GCAGCAAAGA 
    TCCTCAATCA TCTGTGTAGT CCCTACTCCA CTGACGAGGA ACATCTTCAG 
    AATCTGAAGG AGGCCATCAT TGATTTGATA CCCAAGGTGC TAAGAGAAGC 
    ACTTGGTTGG GGGTTGACAG GAGAAGAGAT ACTGCGAGTG GCAGTTTCAG 
    GCCTTGAAGG TACCCAAGAT GATGACTGGA AATTGCAGGA AGCATTGGCG 
    TCCCTCTGTG CAACCGTGTT TAACAGAATT GTCAGCAAGG ATGCAGATTT 
    GACTGCTCGG TTCAACAACA TCGCCGCTGG TATCTGCGAC CAGACAACGA 
    AGCCTCGCAT GACCTTCGCA GACCTCATCA ATGAAGCTGT AAAAGTTCAT 
    CGCATCGAAT TTAAAAAACC AGAAAAACCA AAACCAGCTG CCAGGCCGGA 
    ACTGTACGAG TTTGTGACTG CGAAATACAC CCCGCCCCAC TTTATGTTTT 
    TGGGCGAGGA AGATCCCAAC GCGTGTTGTA TCTCTTGATA ACACCCTAAT 
    TTGTACTTTC TCCGTTTCAC AATGTAAGTC ATTCTATTAT TTCCTATATT 
    TATATGGATA TTAATGAATC TAT

    Gene models with high sequence identity

    1. AT5G18980.1 [+] show detail - ARM repeat superfamily protein
      E-value: 5e-13; Score: 73.60

     

    InterPro Scan Digest

    See the detailed result >

    AT5G18980.1

    Model type
    Protein coding
    Short Description
    ARM repeat superfamily protein
    Computational Description
    ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G06210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR