K37209

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37209

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37209

Determination of introduced cDNA(s)

  • J023012I12 - Rice Full-length cDNAs - Original: J023012I12

    full reading [+] show sequence

    Nucleotide sequence: J023012I12 - full reading 
    GCTAAAAGGA GCACATCTCA CTCAGGCTGG CCGGCCGAAA TCGATCGGCA 
    GCAAAGGCCA ACCAAACTAA GCCAAGAGCG AGCTAGCTAA GCTGGTTTTC 
    TGCTTGTGCC ATGGGAGAAG ATGGCGGCGT GAACTCTTCT TCCAACTCTC 
    CGGCGGCCGC CGTTGGTCTC GTGCTGGTGG TGGCGATCTG CACGTACCTG 
    GCCGTCGTCG CCACCCGCAA GCAGAAGCGG CGGCGGCGGC GGCGGCCGCC 
    GGTGGTCGGC ACGGCATTCC ACCAGCTGTA CCACGTCCGG CGGGTGCACG 
    ACTACCACAC GGCGCTGTCC CGCGAGCACA TGACCTTCCG GCTGCTGGTG 
    CCGGCCGGCC GCGAGCAGAT ATACACGTGC GACCCCGCCG TCGTGGAGCA 
    CATCCTCCGG ACCAACTTCG CCAACTACGG CAAGGGGTCG TTTAACCACG 
    GGAACATGAG CGACCTGTTC GGGGATGGCA TCTTCGCCGT CGACGGCGAC 
    AAGTGGAAGC AGCAGAGGAA GATCGCCAGC TACGACTTCA CCACCAGGGC 
    CCTCCGCGAC TTCAGCGGCG ACGTCTTCAA GAGGAACGCC GCCAAGCTCG 
    CCGGCGTCGT CTCCAGCCAC GCCGCGTCAA ACCAATCCAT GGACTTCCAG 
    GGTTTCTTGA TGAGAGCAAC GATGGACTCC ATCTTCACCA TCGCGTTCGG 
    CCAAGACCTC AACACGCTGG ACGGCTCCGG CGAGGGGCGC CGCTTCGCCG 
    CGGCGTTCGA CGACGCCAGC GAGTTCACCA TGCTCCGCTA CCTCAACCCG 
    TTCTGGAAGC TGTCGAGGCT CCTCAACGTC GGCGCCGAGG CGATGCTCAA 
    GGAGAGGATC AAGGTCGTCG ACGGGTTCGT GTACAAGCTC ATCCGTGACA 
    GGTCCGACGA GCTCTCCAAC ACCAAGGCAC ACGACACTGA TTCGAGGCAG 
    GATATCCTGA CAAGATTCAT CCAGGCAACG ACTAGCGATT CTGGGACGGT 
    TGATTACAAG TACCTGAGAG ACATCATATT GAACATTGTC ATAGCCGGCA 
    AGGACACCAC AGCCGGGTCG CTTGCTTGGT TCCTGTACAT GATGTGCAAA 
    CACCCGGAAG TACAGGAGAA GATCTGCCAC GAAGCCATGG AGGCCACCAA 
    CGCCGGCGAG GCCGCTTCCA TCGACGAGTT CTCGCAGAGC CTGACCGACG 
    AGGCACTGAA CAAGATGCAC TATCTGCACG CTGCACTGAC GGAGACGCTC 
    AGGCTATACC CTGCAGTTCC ACTGGATAAC AAGCAGTGCT TCTCAGACGA 
    TGTATTGCCC AACGGATTCA ACGTCAGCAA GGGGGACATC GTGTTCTACA 
    TCCCCTACGC GATGGGCCGG ATGGAGAGCT TGTGGGGCAA AGACGCTGAA 
    TCCTTCCGGC CTGAACGTTG GCTCGATGAG AACGGCGTCT TTCAGCAGGA 
    GAGCCCGTTC AAATTTACAG CTTTCCAGGC CGGCCCAAGA ATCTGCCTCG 
    GGAAGGATTT CGCGTACAGG CAGATGAAGA TCTTCGCGGC CGTGCTGCTC 
    CGTTTCTTCG TGCTCAAGCT GCGGGACGAG AAGGAGATCA TCAGCTACCG 
    GACCATGATT ACACTCTCCG TCGATCAGGG TCTCCATCTG ACGGCTATGG 
    CGAGATGAGG GCACACACTA CAGTCTGGGC ACGCACAGCA GCTGGCTCCT 
    GTACTCATGC AAGTGATAGC TCCTTGTGCA TACCAAAACG AACGAGATCT 
    GCAAACCTTA ATTATGTCTG ATCGTGAATA ACCCGCATTG CACCCTAGAA 
    TAATAAGTGC ATCTGAACTG CAGTCAGGGT CAGAGTAACT TATTGGAGTG 
    AACTGGTGTT GTAGGGAACT TCAATTGTAC AACTTGGAGG GCGCAATACA 
    AATGAATGGA TTAAATAGTA GAAAGTTGAT TTT

    Gene models with high sequence identity

    1. AT2G45510.1 [+] show detail - cytochrome P450, family 704, subfamily A, polypeptide 2
      E-value: 2e-142; Score: 503.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Cytochrome P450 4e-95
    superfamily Cytochrome P450 3.1e-103
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, E-class, group I 1.9e-18
    FPrintScan Cytochrome P450, C-terminal 2.7e-11
    FPrintScan Cytochrome P450, C-terminal 2.7e-11
    FPrintScan Cytochrome P450, C-terminal 2.7e-11
    FPrintScan Cytochrome P450, C-terminal 2.7e-11
    HMMPanther CYTOCHROME P450, SUBFAMILY 86A, B 1.6e-169
    HMMPanther Cytochrome P450 1.6e-169
    HMMPfam Cytochrome P450 5.3e-77

    See the detailed result >

    AT2G45510.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 704, subfamily A, polypeptide 2
    Curator Summary
    member of CYP704A
    Computational Description
    "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR