K37222

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37222

Determination of introduced cDNA(s)

J023112H03 - Rice Full-length cDNAs - Original: J023112H03

full reading [+] show sequence

GGTCCTTCAT CAAGATGTTA TTCCGAAGCA TAAGCCACAG GAAGATGTCA 
ACTTTCAAAG CAAATTTGAG TGAGAAGGGG ATTTGCATTC TTTTGCAGAT 
GCGAGGCTTT CCTTATAAAA TGATGATTCC ACAGAGAAGT TACGTACAGT 
CCTTGGTAAA AAAAAGACCC CCAAATCAAA TCAGTGCATC ATCCTCATTG 
TTGAGCCTTG GCATTGGCAT TCCTCTTTGA GCTTATTGCA CAATTAAATT 
GATCACCTCA GTGACAGCCT TGTTCCAGGA TCCCACCTAC AATGGCAATG 
GCAATGAATC GATCAGGGCT TCTGCAGCAG GGCGGTGAGG TAGACGTGGT 
CATGCTTGGC TCCGGGTGGC GCCGTGGGCG TGGGTGTGGT CTTGTCGGCG 
ACGGCCCACT TGAGGGTCTT GTAGCCGAGG CGGCGCAGCA TGGGTTGGTA 
GACGGCGGCG AGGTCAGGGC GGCGGCACCA GAAGTGGTCG ACCCAGAGCA 
GGCCGCGGGG GCGCAGCACC CTGTCCGCGT CGTACCACAG GAACTCCAGC 
GCCGCCTCCG GGATCCAGCG GTTCACGGCG TGCCCCGCCC GCACCAGGTC 
CATGGTGGCG TCCCCCACCG GGAAGCGCTG CTGCAGCGGC GCGTGCAGCG 
GCACCACCCC GCGCGCCGCC GCCGCCTCCG AGTAGGGCGC CCCGAGGTTC 
ATAGTGGTGG TGAGCACGGT GGCGTTGGCC GCCCGCTTGA GGCGCGCCGC 
CAGCGTCCCC GTCCCGCCGC CCACGTCCAG CCCCAGCCGG ATGGGCCCCG 
CGCGGCTGAG CGATGCCAGG CGCAGCAGCT GCGGCACCGT GAGGTCGAGG 
GGCCCCTCCG CCCGCAGGAA GCGCGCGGCC TCCGTGCGCG CGAGGTCGAA 
GCCGAGCGAG GGCGGGAGGC AGGAGAAGGA GGTGCATTTG GCCCCCGGAG 
GCCAGCGGAC GGCGGAGTCC GGGAGCGGGG AGAAGGGATC GGTGGGCAGA 
TTATTCAGGT TGTGAGAAGA CGAGATCGAA GATGATGAGA AGCACCTTCG 
CCTGGGCAGC GGGTGGCAGC CGCGGAGGAG GAGGGGCTCG GCGAGGGAGA 
GGGCGTCGTC GGGGCAGGGG GAGAAGGGCG TGTAGGACAT GAATCGGTGG 
AGGAGGTCCG GGTGGGCTGA GCAGGCGGAG GCGAGGGGCG CCAGGCGGGA 
GTAGAGGAGG AGCTCCGGTG GCGGCGGCGG AGGCGGGGGC GTGGAGGAGC 
GGAGGTGGTT GAGTTGGGAG ACGGTGGCGC GGATGGCGGT CAGCTGGCGG 
AGGAGCTGCT CGTCCTGGGC CTGGGCCTGG TGCGCCGCCG GCAAGAGGAG 
CGGCGGTGCG GTGGATGCGC GGGTGGAGAG GTGGTAGAGG GACAGCAGGT 
TGGTGGCAAC CATGGAGAGT AGGAAGGCGA TGTTGAGGCT GCTGGAGCTG 
GAGACCGTCG TCTTCCTCAT CGCCGGCACC CCATCCAGAT GTGAATCCGC 
CATGCCCATG CCCAGAGTGA GTTGTCGGTG AATACAAGAG TGTGGCACCT 
CTCTCTGCTT TCTTGATCTG CTCTGCTCTG CTAATAATAA TAAAATCACT 
TTGACTTGTG TTG

Gene models with high sequence identity

AT1G29790.2 [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
E-value: 6e-82; Score: 301.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Methyltransferase type 11	5.9e-05
superfamily	S-adenosyl-L-methionine-dependent methyltrans	8.9e-11
Gene3D	no description	0.00067

See the detailed result >

AT1G29790.2

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G40830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR