K37318

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37318

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37318

Determination of introduced cDNA(s)

J013067G18 - Rice Full-length cDNAs - Original: J013067G18

full reading [+] show sequence

GAGGGTAACC CACAGCTTAG CTAGCAAGCA GCAGCAAGCC AACATAGTAG 
CTAGCACGTA CAAATGATCG CCATGACTCC TCTTGGACTA CTGCTAGTGC 
TTCTCGTCCT CTGTAGCTCC ATTCTTGTTG CCCATGGAGG AGACGCTGCA 
GCCGGCGCCT ATATGGTCAT AGCAACCAGC ACCATGAAAC CGAAAACTTT 
CTGCTCCGGC CACAAGGTTG CTCCAGGGGA CGTGCCGTCG CCGAACAGCA 
CTTGGGCACC GTTGCATCAC CTGTATGGGC CATGCTCGCC GGCGCCGTCG 
TCGGCCAACA GCACCGCCGC CGACGTCGCC GCTTCCATGG CCGACATGGT 
CGACGACGAC CAACGCCGCG CGGACTACAT CCAAAAGAGG CTCACCGGCG 
CCACCGACGA CAAGCAGCCG ATGGCCTTTT CGAGCAGAAC CTCGCAATAC 
GAGAAGAACG GCCAGTACGC CACTAATGGT GGCTTAGGCA GTGTGCCTCA 
CCTCAAAAGT TTATCAACGA CGGCGACGAC GAATTCGGCG CCGGATGGCA 
CGTCGGCGGT GACCCAGACG GTGATAATCG ACTCCGGCAG CGACGTTTCA 
TGGGTGCAAT GCAAGCCATG CCCCTTGCCG ATGTGCCACC GGCAACGGGA 
CCCCCTGTTC GACCCGGCCA TGTCGACCAC GTACGCCGCC GTCCCCTGCA 
CCTCCGCCGC CTGCGCGCAG CTCGGCCCCT ACCGCCGCGG CTGCTCCGCC 
AACGCGCAGT GCCAGTTCGG CATCAACTAC GGCGACGGGT CGACGGCGAC 
CGGGACGTAC AGCTTCGACG ACCTCACGCT GGGCCCCTAC GACGTCATCA 
GGGGCTTCCG CTTCGGCTGT GCGCATGCCG ATAGGGGGAG TGCGTTCGAC 
TACGACGTCG CCGGGTCACT GGCGCTCGGC GGCGGCTCGC AGTCGCTGGT 
GCAGCAGACG GCGACGCGGT ACGGCAGGGT CTTCTCCTAC TGCCTCCCGC 
CGACGGCGAG CTCCCTCGGC TTCCTCGTTC TCGGCGTGCC GCCGGAACGC 
GCCCAGCTCA TCCCGAGCTT CGTCTCCACG CCACTGCTGA GCAGCAGCAT 
GGCGCCCACG TTCTACAGGG TGCTCCTCCG CGCCATCATC GTGGCGGGGC 
GCCCACTCGC CGTGCCACCG GCCGTGTTTT CCGCCAGCTC GGTCATCGAC 
TCCTCCACGA TCATCTCGCG CCTGCCGCCG ACGGCGTACC AGGCGCTGCG 
CGCGGCGTTC AGGAGCGCCA TGACCATGTA CCGGGCGGCG CCGCCGGTGT 
CCATCCTCGA CACCTGCTAC GACTTCACCG GCGTCCGCAG CATCACCCTG 
CCCAGCATCG CCCTCGTCTT CGACGGCGGC GCCACCGTCA ACCTCGACGC 
CGCCGGGATC CTGTTAGGCA GCTGCCTCGC CTTCGCGCCC ACAGCCAGCG 
ACCGCATGCC CGGCTTCATC GGCAACGTGC AGCAGAAGAC GCTGGAGGTG 
GTGTACGACG TTCCCGCCAA GGCCATGCGA TTCAGGACCG CCGCCTGCTA 
AGTGCTAATT CAAATTTGCT TGCTTGCCAA ACTAGCGTAT TGTTAGCTTA 
TTATTCGAAT ATAAGCTAGC TAGTTGATGA AATAATTAGT CAAAGTGATT 
GTTGTTTATG TTTTGATGCC ATGTTTATCC TACATGGCGT ACTAGTAGAG 
CATCTATCTC TATGGAAAGG GATTAAAGTA GCTAGCTTAA TTGCAGCATT 
GTCTGCTAAA GTTTAGGCTA GCTACTAAAG CTCTTTTATT TATCTTGTCT 
GCAATAATTT GTTATCTTGA TGTGATTTCG GTCGTGTGAG ATTGTAATAT 
CGAGTTATGC ATCTCCATCT TGCATGTCAA GTGATGTACT ACTTTTTCCG

Gene models with high sequence identity

AT5G10770.1 [+] show detail - Eukaryotic aspartyl protease family protein
E-value: 2e-59; Score: 227.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	Peptidase aspartic, catalytic	6.8e-21
Gene3D	Peptidase aspartic, catalytic	3.9e-35
HMMPfam	Peptidase A1	8.7e-09
superfamily	Peptidase aspartic	6.1e-79
HMMPanther	CHLOROPLAST NUCLEIOD DNA-BINDING-RELATED	4.2e-67
HMMPanther	Peptidase A1	4.2e-67
PatternScan	Peptidase aspartic, active site	0

See the detailed result >

AT5G10770.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR