K37523

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37523

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • low saturation (PATO:0000328)
    (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37523

Determination of introduced cDNA(s)

  • J023143G06 - Rice Full-length cDNAs - Original: J023143G06

    full reading [+] show sequence

    Nucleotide sequence: J023143G06 - full reading 
    GATTCACCCC TTTTTCCCCA CGCTCCGGTG GCTCCACGCC GCCCCGCCCG 
    CCGCCGCGAC CACCCGTTCC ACCGGCGAAT CCGCGGATTT AATCTCCCAC 
    AGCTCCCCGT GAGATCACAA AGACCGGGCG GGCGTGGGCT GTGGGCTGGG 
    ATGGTGGGCG ACCTCTCCTC CCTCCTCGCC GCCGCCTCCT CCGCCTCCCC 
    CGTCGTCCTC GCGCCATCAA AGGAGCTCCA TGGCGTGCAC TTGCCGATGC 
    CGCTCCAGGG GAAGAGGCCG CCGCTGCAGC CGCAGGACGC TGCCGTCCAC 
    ATCGAGGCCG CCGCCGCCGC CGCCGCCGCC GCCTTCCAGG GGCAGGTGAT 
    GGTGCCCGGC CACGCGCATG CCGGCGCTCC CGCCGCCTTC CAGGCCTTCG 
    CTGTGCCCGA CATGGCCGCG CTCATCGACG TCCAAGACTC TCACCCTGAC 
    TCAGTTCAAC TTAGCCTTGG GATTGCCGAG CAATGCTCAA GGCAGGAGAA 
    AATCCTGAAA TTTCTAAGGT CAGGGTCCGA TGTGAAAGAA CTTGATGTAT 
    CTTTACTGAC TGAACTTACG GGGCATCAAA CTCTGCCAAT CAACTTGGGT 
    ACTCAACCAT ACATCCCTGA TGATAAGTTA TCAGCTCTTC CAATCAGCAT 
    GGCCAGTCAA CCATATATCC CTGACGATAA GTTATCTATC TATGAGTTTG 
    AATTGGATGA GCCCCAGCAG TATCTACCAG AAAATCAACT TGTCATCCCT 
    GATCCTCTTG TGGAGTTTTT CCAGTCCCAT GGTTCTGCCC TTACCATAGA 
    TCAAAACAGG AGAATCCTCT TCAATGGAAA TGGAGATGAT ATGAGATATT 
    TACTTTCGAT TGTCTTGGCA TTCAATATGT CTAAACGAGA AATAAGCAGT 
    TGCAAGACAG CATATCTAGT TCCATATTTT GAAAGGAAAA GGCGATCCCG 
    AGCAAGCAGC CATGCATCCA ATTCAAAATT AGCAAGCACA GCAGTTGATG 
    CTTCAAAAAG CACTGCAAAT GGGAAGTCAA AATCTTCATC AAGGAAGAAG 
    CAGAAGAGTA AAAATATTAA AGAACGTGAC CTGTACCCGA AGAACTATTT 
    CCATGCTAGT GAAGCATTTT TATCTATGCT CCTGGACAAG GACAATAGCA 
    GCTCAACAAT TCATTCACTG AAAAAAGCTG GTCCTGAGAT CAGTGAACTG 
    CTGACAAAAT GCTCTATTGG CATCGCTGGA ACTGGCTTGG CTGTTCTTCT 
    CTCAGTTGTG TGCAAGATGG CTACCGGTAT GAAGAGTCCT ATTGCTGCTA 
    CGCGGCTGGT GAACACTGGT GTTGGACTTG GGCTCTTTTG GCTCTCCTGG 
    GCAGTAAACG GATTGCGAGA CACAATTACT AGCATATTTA GAAGCCCAGG 
    TGACATGAAC TTGAAGGACG AAGAGGTTGC AGTCAGGATA CAAAAGAGCA 
    TGAACGACAT TCTCTTCAGA GCTATCACTA TATTGGCAAT CACTGCTTTT 
    AAGTTTGCGT AAGTGGTTAC ATACTAATTT ACCTTTTCCC CGACCCACCT 
    GTAATATATA ATCCACCATT TTGGTTCAGG AGTACAGCAC TAGTGCTTCT 
    GTAGGATTAA GTGCCAATTG AGCAAATGAT CCCCGGTAAT TTTGTAGAAA 
    ATGAGAAACC GTTGTGAACT GTACAGAATT TTGCTGGCAG CTTGGTGTAT 
    ATGAAAGATG GGTTTTTTTC TTATCTGT

    Gene models with high sequence identity

    1. AT4G02920.2 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); ...
      E-value: 4e-40; Score: 163.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G02920.2

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR