K37839

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37839

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37839

Determination of introduced cDNA(s)

J023021I18 - Rice Full-length cDNAs - Original: J023021I18

full reading [+] show sequence

GGTCAAAATC GTGTCGATTC ATCGGCCAAC TCCAAACCAA CCAACCAGCA 
GTTGCCGCCA TCTCTCATCT CTGTCACGTA ACACGAGTAC GTACACAACA 
CAAAATCTGC AAAATATTTT GGTTGCCTGC TCGGAGAGGC GAAGAAAATG 
GCGTTCCGAC GAACACTAGC ACGCGGCATA TGGGCGGGGA AGAACGCGAA 
CGCCGCCGCC GCTTGTCCGG CGGCTGCGGC TCCAAAACCT CCGGCGCGGC 
GGCCGTTGCC GGCGGTTGAC GACTGCCCGA CGCTCGCGTA CCTGCGGCCC 
AGACCGGGAA CCATCCGGTA CACCACGGCG TCCGTTCCGC TTCCCGCCCA 
TTGCTTCCCC GCCCTCCCCG TCGGCGACCA GCTGTTCAAC CGGCTCCGCC 
TCGACGGGCT GGTCCCGCCT ACGACGGCCG TGACGCGGCC ACCGGAGGAG 
GAGGGGGTGG GCGTGACGGT GGAGGAGGCG AGGAAGGTGG CGCGTGCGGC 
GGAGATGGAG GTCGCGCGGG CGAGGCTGAG GTCCAACGCC CAGAGCGTCG 
TGTCCGGGTC GGAATTCGCC GCGCTCTGCG TCGACATTGC CGGCGGCGCC 
GAGGGAGGAC GCAGGCTCGC CCGCGCGCTC GACGACTCCG GCGTCGTCAT 
CGTCCTCGGC GACGCCGTCT TCCTCCGCCC CGACATGATA GCGAAAGCGA 
TCGGGAGCAT GATACCGGCG ACGGCACACG CGACGCGAGC TGCAGCAAGC 
GTCGTCGAAG TGCGGAAGAA ACGGGAGGAG GAGGAGGAGC TGCGGGCGAT 
GGAGGAGGAG AAGGCGGGCA TCGACGCGGC GGCGGCGGCG CAGGTGCGGC 
GGGAGCTGTG GTGCGGGCTG GGCCTCCTGG CGGCGCAGAC GCTGGGGTTC 
ATGCGGCTCA CCTTCTGGGA GCTCTCGTGG GACGTCATGG AGCCCGTCTG 
CTTCTACGTC ACGTCGCTCT ACTTCATGTC CGGATACGCC TTCTTCATGC 
GCACCTCCAC GGAGCCGTCC TTCGAGGGCT TCTACCGCAG CCGCCTCGCG 
TCCAGGCAGC GACGCCTCAT GCGGGCGCGC AGCTTCGACG TCGCCCGGTA 
CGAGGCGCTG AAGGAGCAGG TGGGAGGAGG AGCACGGTAC GGCGTCGCGG 
CGCGCGACGC CATCGTGTTG AGGCAGCAGC ACGTCACGCA CGTTCATTAG 
CAGCAGCAGC AGGGTGTTTT TTTTTTTTTT TGGTGTGGCT AATTAGGTGT 
GACGTCGAGC GCGTGCGTAG TTGCCAGCTA GGAGTAGTAC AGTAATACTG 
TACTCCACGT AGTTTGAGAC GTGGACGATC CGGGACTCGG GTGAGTCCAT 
GATGTCCAGC TGTACCAGCA GCCATTTATT CGGTCAGAAA TCTGAAAAAT 
TGGTTGAATC ACTAAGTAAA ATTTTTTCTC C

Gene models with high sequence identity

AT2G23790.1 [+] show detail - Protein of unknown function (DUF607)
E-value: 3e-43; Score: 173.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	SUBFAMILY NOT NAMED	1.2e-80
HMMPanther	Protein of unknown function DUF607	1.2e-80
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPfam	Protein of unknown function DUF607	2.5e-55

See the detailed result >

AT2G23790.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF607)
Computational Description: Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link: InterPro Scan - TAIR