K38144

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38144

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38144

Determination of introduced cDNA(s)

  • J033101I24 - Rice Full-length cDNAs - Original: J033101I24

    full reading [+] show sequence

    Nucleotide sequence: J033101I24 - full reading 
    GTTCGTCAGT TTGTCCGCCC GCCGCCGCCG CCGCCGCCGC CGTCGATCCC 
    CATCCATCGC GCGCGCGAGC GAGCAGGGGG CGCCGTCGTT CGTCCTGCTG 
    CTTCCGCCGC ATCCTGGCGG GCACATCCTC CGCCACCGCC GCCCGCGCCG 
    ATCCCCACCC ATCGCGCGCG CGCGCGAGCG AGCAGGGTCG CCGTCGTTCG 
    TCCTGCTGCT TCCGCCGCAT CCATCCTGGT AACCGGGAGC ATCACACGTG 
    CTCGCTCAAT TCGGATTAGA AGAAACAGCT TTGTGGTACT TTGGGGTTGG 
    ACTGTTTTGT GAATCTGCTG TGAGGGCTTG TTTTTCTTGG TAGCTTTTCG 
    GGATACGACG GAATGGAGTG CAATAAGGAT GAGGCTCTTA GGGCGAAGGA 
    GATTGCAGAG AGGAAGTTTG AATCGAAGGA CCTGCAGGGG GCCAAGAAGT 
    TCGCCCTGAA GGCGCAGGCT CTCTTTCCTG GGCTTGAGGG CATTGTTCAG 
    ATGATCACCA CCTTGGATCT CTATCTTGCT TCAGAGGTGC TAATTTCTGG 
    GGAGAAGGAT TGGTACTCTA TCCTTTCCGT GGAGTCTTCT GCTGATGATG 
    AGACTCTAAA GAAGCAGTAC AGGAAGTTGG TCCTTCAGCT CCATCCTGAC 
    AAGATCAAGT CGGTGGGTGC TGAGGGTGCT TTCAAGATGG TCCAAGAGGC 
    GTGGACTGTG CTGTCGGATA AAACAAAGAG AGCTCTGTAT GACCAAAAAA 
    GGAAACTAAT GGTTCTGAAA CGGAATACAT CTCAAACAAA TAAAGCAAGT 
    GCAGCTCCTG GTGCATCCAA TGGCTTTTAT AATTTTGCAG CCAATGCTGC 
    TGCTTCCAAG GTGACAAGAG GAAACAAGCA AAAGGCAGGA CCAGCAACAT 
    CTTCAGTGCG CCAGCGCCCA CCCCCTCCCC CTCCCCCTCC CCGTCAGGCT 
    CCTGCTCCAC CTCCAGCAAA GCCACCTACA TTTTGGACCT CATGCAACAA 
    ATGCAAGATG AATTATGAAT ACCTGAAAGT GTATCTAAAT CACAATCTTC 
    TCTGCCCTAC CTGCCGTGAG CCATTCCTAG CACAAGAGGT ACCAATGCCA 
    CCCACCGAGA GTGTTCATGC TGTACATGAT CCGAACATCA GTGGTGCAAA 
    TCAAAACACA AATGGTAGTA GAAATTTCCA ATGGGGTCCG TTCTCAAGGA 
    CAGCTGGCGC AGCTAGTGCT ACCGCATCAT CTGCTGCTGC TGCTCAAGCC 
    GCGAATGTGG TTCATCACAC ATATGAGAAA GTTAGGAGAG AGAGGGAGGA 
    GGCACAAGCA GCTGCTAGAA GGGAAGAAGC TCTTCGGAGG AAGTACAATC 
    CACCAAAAAG GCAAGCGAAT ATCTCAGAGA ATCTTAACCT TGGAACAGGT 
    GGCAACTCAT CTAAGAAGAT GAGAACTATG GGTAACGATA TTGGAATTGG 
    TTCTTCATCC ATTCTATCAG GTTCAGGGGC CAATTATTTT GGAGTTCCAG 
    GTGGAAATAT ATCATTTTCT ACCAACAGTG GAGCACATCA TTTTCAAGGT 
    GTTAATGGTG GATTCAGTTG GAAACCCAGA CCTCCTACTC GCATCAGCTT 
    AGTCAAGACC TTCACGCAGT TTGATGTTAG AGGTATTTTG ATGGAAAAAG 
    CAAAGAGCGA TTTAAAGGAC AAGCTAAAGG AGATGCAGAC TAAAAGATCA 
    CAGGTTGCTG CTAATGGAAA AAAGAATAAG AAAAACATGT TTAAAGAAAG 
    TGGTGGGGAT GATAAATCTC TTGCATCAGA TGATTCTACT GCACGTCAAG 
    CTGCACATGT TGATCCAGAG GACAATGCTT CTGTTAATAG CACAGATGCT 
    GATGATGAAA ATGATGATCC TTTATCTTAT AATGTTCCTG ATCCTGATTT 
    CCATGACTTC GATAAGGATC GTACTGAAGA ATGTTTTCAG AGTGATCAAA 
    TTTGGGCTAC ATATGATGAT GAAGATGGTA TGCCTCGTTA TTATGCATTT 
    ATTCAGAAAG TTCTCTCCTT GGAGCCATTC CAGCTCAAAA TTAGCTTTCT 
    CACATCAAGG ACAAACAGTG AATTTGGTTC TTTGAACTGG GTCTCGTCTG 
    GCTTCACAAA GACATGTGGT GATTTCCGGA TTTGTAGATA TGAAACCTGT 
    GATATACTCA ACATGTTCTC TCACCAGATT AAATGGGAGA AAGGCCCACG 
    TGGGGTTATA AAAATTTATC CACAGAAAGG TAACATCTGG GCTGTGTATC 
    GAAATTGGTC CCCTG

    Gene models with high sequence identity

    1. AT2G05250.1 [+] show detail - DNAJ heat shock N-terminal domain-containing protein
      E-value: 3e-75; Score: 280.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Heat shock protein DnaJ 1.2e-09
    FPrintScan Heat shock protein DnaJ 1.2e-09
    HMMSmart Heat shock protein DnaJ, N-terminal 2.3e-22
    superfamily Heat shock protein DnaJ, N-terminal 1.6e-22
    Gene3D Heat shock protein DnaJ, N-terminal 2.4e-19
    ProfileScan Heat shock protein DnaJ, N-terminal 17.908
    HMMPanther DNAJ-RELATED 4e-45
    HMMPanther Molecular chaperone, heat shock protein, Hsp40, DnaJ 4e-45
    HMMPfam DUF3444 1.7e-52
    HMMPfam Heat shock protein DnaJ, N-terminal 1e-21
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT2G05250.1

    Model type
    Protein coding
    Short Description
    DNAJ heat shock N-terminal domain-containing protein
    Computational Description
    DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR