K38201

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38201

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38201

Determination of introduced cDNA(s)

  • J023018L01 - Rice Full-length cDNAs - Original: J023018L01

    full reading [+] show sequence

    Nucleotide sequence: J023018L01 - full reading 
    GACGTGAAGC TCATCTGCCT CCTCCTCCTT GCCGGAGCTA GCCTCGCCGC 
    GTGCACCGCC GGCGACGGCA ACGACGACGA CCACCAGTTC GTTTACTCAG 
    GCTTCACCGG CAGCAACCTC ACCCTCGACG GAGCCGCCGT GATCACGCGC 
    ACCGGCCTTC TCGAGCTCAC CAATGGCACG CTCCGCCAGA AAGCCCACGC 
    CATCCATCCG GCCCCGTTCC GCCTCCGCGG CGGCTCGTCG TCGTCGTCGA 
    CGGCGACGGC GACGGCGACG GCGACGGCGA CGGCGACACG GTCCTTCTCG 
    GCGTCCTTCG TGTTCGCCAT CCTATGCCCC GACGCCGACG CCTGCGGCCA 
    CGGCATCGTC TTCTTCGTCG CACCGGCCAA CCACAGCTTC TCCGGCGCGT 
    TCCCCAGCCA GTACATCGGC CTCTTCAACG GCAGCAGCGA CGGCGACGCC 
    GGGAACCACC TCGTCGGCGT CGAGCTCGAC ACCGACCAGA ACAACGAGTT 
    CCGTGATATC GACGGCAACC ACATCGGCGT CGACATCAAC AGCCTCACCT 
    CCATTAACTC AACCAGCGCC GGCTACTACG ACGACAACGA CGGCGGCAAC 
    TCCGGCGACC ATGGCTTCCA CAACCTGACG CTGGCGAGCC ACGGCGAGGC 
    CATGCAAGTG TGGGTCGATT ACAACGGCAC GGCCAAGCAG ATCACCGTCG 
    CCATGGCTCC CCTCAAGATG GCCAAGCCTT CCAAGCCATT GTTGTCTTCT 
    ACCTACGACC TCTCCACGGT GTTCGTCGCC GACGAGCCCT ACATGGTGGG 
    CTTCTCGTCG GCGACGGGTT CTTTCAACTC CAGACACTAC GTTCTCGGTT 
    GGAGCTTCGC CATGGATGGA CCTGCTCCGG CCATCGACAT CGACAAGCTG 
    CCCAAGCTGC CTCGCTTCGC CCCCAAGCAC AAGCCCAAGA TGGTAGAGAT 
    AATTCCGCCA TTGGCGACGG CTACATTCAT CGTCGCATTG GGAACCGTCT 
    CTGTTCTTCT GATACGGAGA CGGATGAGGT ACACCGAGTT GCGGGAAGAT 
    TGGGAGGTTG AGTTTGGACC GCATCGGTTC TCCTACAAGG ACTTGTTCCG 
    CGCCACGGAT GGATTCAAGA GCATGAATCT GGTTGGTGTC GGAGGATTTG 
    GGAGAGTATA CAAGGGAGTG CTTCAATCAT CTAAATTGGA GATTGCTGTC 
    AAGAGGGTAT CACATGATTC GAAGCAAGGC ATGAAAGAGT TCATTGCGGA 
    GGTTGTTAGC ATAGGTCGAC TACAGCATCG TAATCTTGTT CAGTTACTTG 
    GTTATTGCAG GCGAAAAGGT GAACTTCTTT TGGTGTATGA GTATATGGCG 
    AATGGAAGTC TTGATAAACA CTTGTACAGT GAAGGTGATA AGCGGGTTTT 
    AGATTGGGAT CAAAGACTTC AAATCATCAA AGGAATTGCA TCTGGTTTGC 
    TCTACCTTCA CGAGGAGTGG GAGAAAGTGA TCGTCCACCG GGATATTAAA 
    ACAAGCAATG TCCTCCTCGA CAGCGAGATG AATAGTCGAT TAGGTGACTT 
    TGGCTTGGCA AGGCTTTATG ACCGTGGTGC AGACCCACTG ACCACTCATG 
    TGGTTGGTAC CATAGGATAC CTAGCGCCAG AACTAGGCCG TAGCAGCAAG 
    GCCACTCCTT TGACTGATAT ATTTGCTTTT GGCATATTTA TTCTCGAGGT 
    TACTTGTGGG CGAAGACCAA TCATGCAAGT TCCAGAGGGC GAACAACATG 
    TGTTGGTTGA CTGGGTGCTC GAGCATTGGC ACAAAGGATC AATAACTGAG 
    ATAGTGGATA CAAAGCTCCA TGGAAACTAT AATGTAGATG AGGTATGTCT 
    AGTACTAAAG CTTGGATTAT TATGCTCACA TCCTCTCTCC AATGCAAGGC 
    CCAATATAAG GCAAGTGATG AAGTACCTAA CTGGAGACAT GGCAATGCCA 
    GAACTGGTGC CAACACACCA CAGCTTTCAT ACACTTGCAC TGATGCAGAA 
    CCAAGGATTC GACTCATACG TCATGTCATA CCCTTCATCA ACGGCAAGCA 
    TGAGCGCCAT GTCCAACAAC CTTTCAGCAC AAAGATGAAT TACAGTGTTA 
    ACATATTGTA CTTATGTAAA TTTTGCATGC TTAGTCACTT AGATACTCAA 
    GTGTGGCCTC CATTTTCAAC TTTACTGTTT TATTTTTTTA AAAAAAAATA 
    AGTTACTGAA AAAGAGTTAT ACTGTTTAAT GAAATTCAGG CCAAAAAGTA 
    CCGAGTGAAA TTACTGAATT TCAATTATTG CAGTGGATAA TGC

    Gene models with high sequence identity

    1. AT2G37710.1 [+] show detail - receptor lectin kinase
      E-value: 3e-171; Score: 599.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SERINE/THREONINE-SPECIFIC KINASE LIKE PROTEIN 1.3e-192
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 1.3e-192
    superfamily Protein kinase-like domain 5.7e-82
    superfamily Concanavalin A-like lectin/glucanase 8.5e-73
    ProfileScan Protein kinase, catalytic domain 37.036
    HMMSmart Serine/threonine-protein kinase domain 8.7e-38
    HMMSmart Tyrosine-protein kinase, catalytic domain 2.5e-20
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    PatternScan Legume lectin, beta chain, Mn/Ca-binding site 0
    HMMPfam Legume lectin, beta chain 1.9e-72
    HMMPfam Serine/threonine-protein kinase-like domain 3.9e-48
    Gene3D Concanavalin A-like lectin/glucanase, subgroup 1e-62
    Gene3D no description 3.2e-25
    Gene3D no description 4.8e-48

    See the detailed result >

    AT2G37710.1

    Model type
    Protein coding
    Short Description
    receptor lectin kinase
    Curator Summary
    Induced in response to Salicylic acid.
    Computational Description
    receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR