K38320

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38320

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38320

Determination of introduced cDNA(s)

  • J023102F19 - Rice Full-length cDNAs - Original: J023102F19

    full reading [+] show sequence

    Nucleotide sequence: J023102F19 - full reading 
    GGTTAAAGAT GATGAGGCTG GGAAGGGCGC CCTGCTGCTA CTGCTTCACC 
    GAGCCGCACC CCGCCGGCGG CGTCGCGGCC GCCGTCAGGC TGCGACTGCT 
    GCCGCCTGCC CGCGCCGCGA ATACCTCCTC AGAGCCGGCG GCGCGGCTGA 
    GGGCGGTTCT CGAGCAGGTG GACGAGGAGC TGCGGAAGGG GAACGACGAG 
    GCCGCGCCGT CCCTCGTGCG CGGCTCGCAG GGGGCGGATG GCGGGCTCCG 
    GTTCTTTGGC GCGGCGAGGC AGGTACCTCA AAGACTTTAT ACATTGGATG 
    AGCTGAAGTT AAATGGGATC GATACTTCTG CTTTCCTATC TCCTGTTGAT 
    CTGACTTTGG GATCAATTGA GAGAAATCTC CAAATTGCTG CAGTTCTAGG 
    AGGGCTCTCT GTATCAGCTG CATTCGAGCT TTCTAAACTC CAAGTTCTGT 
    TTCTGTTTTT GGGTCTACTA TCTCTGTGGT CGGTGGATTT GGTATATTTC 
    GGTGGTGGAG TGAGAAACTT GATTCTTGAT ACAATTGGTC ACAATCTTAG 
    CCAGAAGTAT CGTAATAGAG TTATTCAGCA CGAAGCTGGC CACTTCTTGA 
    TAGCGTATTT GCTTGGGGTC CTTCCCAAAG GATACACTAT CACAAGTTTA 
    GATACATTCA TAAAAAAGGG CTCACTGAAT GTGCAAGCTG GGACAGCTTT 
    TGTTGACTTT GAGTTCCTTC AAGAGGTCAA TTCAGGCAAA CTATCTGCCA 
    CGATGTTGAA CAAGTTCTCA TGCATTGCCT TGGCTGGAGT AGCAACAGAG 
    TATCTTTTGT ATGGATATGC TGAAGGAGGA CTAGCTGACA TTGGGCAACT 
    AGATGGATTG CTCAAAGGTC TAGGTTTCAC CCAGAAGAAA GCTGATTCAC 
    AGGTGAGATG GGCTGTGCTG AATACTGTAC CTGCACTGCG TCGCCATAAA 
    AAGGCCAGAT CACAGCTCGC GGAGGCAATG TCCTCTGGGA AGTCAGTTGG 
    ATCTTGCATC GGGGTCATAG AAGAGAATAT AAACTCTGAG GATATTTAGT 
    TAGTGACTAT AAAGATGATG GAAAATATAG ATCACATATG TACAAACTTT 
    CACAATGGAC TGTACCTTTT AACTTGGGCT TTGTATTTAG TCTGTTAGCA 
    GGAAATACAT GTCAAAATCA TGGTTTTTAT TCAGTTTCAT ATATTAAACG 
    TTT

    Gene models with high sequence identity

    1. AT5G27290.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13...
      E-value: 4e-107; Score: 385.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G27290.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR