K38325

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38325

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38325

Determination of introduced cDNA(s)

  • J013096P20 - Rice Full-length cDNAs - Original: J013096P20

    full reading [+] show sequence

    Nucleotide sequence: J013096P20 - full reading 
    GGACTCGATT AGAATTGCCA GAGTAATCGG AGCTCCGGTT CCGATCCCTG 
    TCCATGGCGC GCTGCGGCGG CGAAAGGATG GTGGACGAGC TGCGCGACGT 
    GCTGGACGAC TTCGCGTTCC GGGCCAAGCG GCTGGCCGCG CCGCTGCTGC 
    AGCCGTTCGG CCGCGCCTCC GAGGCGGTGG CGCTTGACGG CGCGGAGATC 
    GACGGGCTCA GGCGCATCCG CGCGGCGCTC CGGGCCGCCG AGGAGCGCGT 
    GGTCACCGAT GACTTCGTCA GGCTGTGGCT GCGGGAGCTG GAGGACCTGG 
    AGCGCATGGC CGAGGACGTG CTCGAGGAGC TCGAGTTCGA GGCGCTCCGC 
    GCGTCCCGCC TCGAGCGGTT CAAGCTCCAG CTCCTCCGGT CCAGCGCCGG 
    CAAGCGGAAG CGCGAGCTCA GCTCGCTCTT CTCCTCCTCC CCGGATCGCC 
    TCAACCGCAA GATTGGGAAG ATCATGGAGC GCTACAACGA TCTCGCCAGG 
    GACCGGGACG CGCTGCGGCT GCGAAGCAGT GATGAGGAGA GGCGACGTGA 
    GCCGAGCCCA CTGACGCCGA CCAGCTGTTT GACGAAATGC TCCCTTCATG 
    GAAGAGAGCG GGACAAGAAG CAGGTCATTA AGCTGCTCCT ATCTGATGAA 
    TATAACTGCC AGGGTGTCTA CTCTGTTGTG CCTATAGTTG GCGCTGCTGG 
    TGTTGGGAAG ACTAGTCTGG TTCAACACAT CTACAATGAT GGGGCCTTGA 
    GATCCAAGTT TGACATGAAA ATGTGGGTCT GGGTGTGCCA AGAGTTTGAT 
    GTATTGAAGC TCACAAGGAA GCTCGCTGAA GAAGCAACGG AGTCCCCTTG 
    CGGCTTCGCT GAGATGAATC AACTACATCG AATCATTGCT AAACGGCTGG 
    AGGGAAAGCG ATTCTTGCTT GTTCTTGATG ATGTATGGGA TGAGAGTCTA 
    CTCCGCTGGA CAAGCTTGCT GGTTCCTCTA AAATCTGCTG CACCTGGTAG 
    TAGAATTGTA GTGACGACTA GAAGTGCTAA AGTTGCTCGA ATGATGGCAT 
    TCAAGATACA CCAACTGGGG TACCTCACTG ATACTACCTG CTGGTCTGTG 
    TGCCGAAATG CTGCCTTGCA AGACCGTGAT CCTAGTATTA TTGATGACGG 
    CTTGATTTCT ATAGGTAAAT CTGTTGCAGC CAAGTGCAAA GGCTTGCCAT 
    TGGCTGCAAA TGCAGCAGGA AGTGTTCTAT CCATTGCAAT TGATAGGAAG 
    CACTGGGAGA CTGTTGAGCA AAGTGACTTG TGGGCTAACA ATGAAGTGAT 
    TGATCATACC CTTCCTGCTC TTCTAGTGAG CTACAATAGC TTACAGAAGC 
    CTTTGAAACA TTGTTTCTCG TATTGCTCGC TGTTTCCGAA GGAGTATGTG 
    TTTAGAAAAG ACAAGCTGGT CAGGCTATGG TTGGCACAAG GCTTTGCTGC 
    AGCAGATGGA GAAAGCGATG CTGAAGATAT TGCTTGCAGG TACTTTCATA 
    ACCTCGTGGA GAGGTTCTTT CTTCAGCAAT CTCCATCTTA TGACCATAAC 
    GAGCAAAGGT ATGTCATGCA TGATCTCTAC CATGAGCTTG CTGAGTACGT 
    AGCAGCCGAT GAGTACTCTA GAATAGAGAG ATTTACATTG AGCAACGTAA 
    ATGGAGAAGC TCGCCATCTA TCCTTGACTC CAAGCGAGAC TCATTCTCAT 
    GAAATAGGAG AATTTCATGC ATCCAATAAC AAATATATGA ATGAATCCCA 
    ATACCCTGGC CTGCGAACTT TGCTGGTTGT CCAGAGAACC AAACATGACG 
    ATGGAAGAAA AACTTCGAGC ATACAAAAAC CAAGTGTTCT GTTCAAAGCT 
    TTTGTATGTT TAAGGGCTCT GGATTTGAGT AATACTGACA TGGAGGGCCT 
    GCCAAACTCT ATTGGGGAAC TGATACACCT TAGGTACCTC AGTCTTGAGA 
    ACACCAAAAT CAAGTGCCTG CCAGAGTCAA TAAGTTCTCT ATTCAAGTTG 
    CACACGATGA ACCTCAAGTG TTGCAACTAT CTTAGTGAGC TGCCACAAGG 
    GATAAAATTC CTTGCTAACT TAAGGCATCT TGAACTACCA CGCATAGATA 
    ACTGGAATGT GTACATGCCA TGTGGAATTT CTGAATTAAC TAATCTCCAA 
    ACAATGCACA CGATCAAGTT CACAAGTGAT TCAGGAAGTT GTGGGATTGC 
    TGACTTGGTT AACTTGGACA ATCTTAGAGG TGAGCTGTGC ATATCAGGCA 
    TAGAGAACGT AAGCAAAGAA CAAATTGCTA CAGAAGCTAT CATGAAGAAC 
    AAAGGTG

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 4e-83; Score: 306.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther LEUCINE-RICH REPEAT CONTAINING PROTEIN 0.0000000000069
    HMMPanther LEUCINE-RICH REPEAT-CONTAINING PROTEIN 0.0000000000069
    Coil coiled-coil 0
    HMMPfam NB-ARC 4.4e-64
    superfamily L domain-like 2.9e-19
    superfamily P-loop containing nucleoside triphosphate hyd 0.0000000001
    FPrintScan Disease resistance protein 1.1e-16
    FPrintScan Disease resistance protein 1.1e-16
    FPrintScan Disease resistance protein 1.1e-16
    FPrintScan Disease resistance protein 1.1e-16
    Gene3D no description 0.00000001

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR