K38635

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38635

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38635

Determination of introduced cDNA(s)

  • J023039C20 - Rice Full-length cDNAs - Original: J023039C20

    full reading [+] show sequence

    Nucleotide sequence: J023039C20 - full reading 
    GGACCGAGAC TCCTCCATTT CAGCGGCGCA CGCGGAGAGC ACGCGACGCG 
    AGTTCGTCGA CGAACAAGGC TAGTGCAGTA GTTGTTGCTG CGGAGATGGC 
    GGCGAACCTG GAGGACGTGC CGTCGATGGA GCTGATGACG GAGCTGCTCC 
    GCCGCATGAA GTGCAGCTCC AAGCCCGACA AGCGCGTCAT CCTCGTCGGT 
    CCACCTGGCT GCGGAAAGGG AACACAGTCA CCGCTGATTA AGGATGAATT 
    TTGCTTGTGC CATTTAGCCA CTGGTGATAT GTTGAGGGCT GCAGTGGCTG 
    CTAAAACTCC ACTTGGGATT AAGGCTAAAG AAGCTATGGA CAAGGGAGAG 
    CTTGTTTCTG ATGACTTGGT TGTTGGGATT ATTGATGAAG CCATGAAGAA 
    AACTTCATGC CAGAAAGGTT TTATCCTTGA TGGTTTCCCT AGAACTGTTG 
    TTCAAGCACA GAAGCTTGAT GAAATGTTGG CCAAACAAGG TACTAAGATT 
    GACAAGGTTC TAAATTTTGC AATTGATGAT GCAATACTGG AAGAACGAAT 
    TACCGGTCGT TGGATCCACC CATCAAGTGG TAGATCTTAT CATACAAAAT 
    TTGCTCCTCC TAAGACTCCT GGACTTGATG ATGTTACTGG AGAACCCTTA 
    ATTCAAAGGA AAGATGACAC AGCTGCAGTA TTGAAGTCAA GGCTTGAAGC 
    CTTCCACGTA CAAACTAAGC CTGTGATTGA CTACTACACC AAGAAGGGCA 
    TAGTCGCAAA TCTGCATGCC GAAAAACCAC CAAAGGAAGT GACTGTTGAG 
    GTCCAGAAAG CCCTATCATA AACTGCCAGT TCTTCAGCCT ATAAACATGA 
    CATGTGCCGA AAACCCCTTA CACTGGGTTT TCTAGATGTT TAAACTGCTG 
    CCAACACCAT GTGGTTCATT TTGATTTGCT GTATGGCGCA ATTGCTCCAT 
    TTTATCACAG TTTTCGCTTC ACAGTCTGAA ATTTGTCAAA ATAATTTGTT 
    GGAATGAGGA AAGAAGTTTT GTATACCAAC ACCGATATAA TTACATCAAG 
    TCAATCTTGA CAGGGTATTC CTTCTGTTC

    Gene models with high sequence identity

    1. AT5G63400.1 [+] show detail - adenylate kinase 1
      E-value: 1e-112; Score: 403.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Adenylate kinase 0
    FPrintScan Adenylate kinase 2e-33
    FPrintScan Adenylate kinase 2e-33
    FPrintScan Adenylate kinase 2e-33
    FPrintScan Adenylate kinase 2e-33
    FPrintScan Adenylate kinase 2e-33
    HMMPfam Adenylate kinase 5.7e-59
    HMMPfam Adenylate kinase, active site lid domain 5.6e-16
    HAMAP Adenylate kinase 30.938
    HMMTigr Adenylate kinase, subfamily 1.8e-117
    superfamily P-loop containing nucleoside triphosphate hyd 1.9e-44
    superfamily Adenylate kinase, active site lid domain 1e-13
    HMMPanther ADENYLATE KINASE 1.2e-113
    HMMPanther Adenylate kinase 1.2e-113
    Gene3D no description 2e-73

    See the detailed result >

    AT5G63400.1

    Model type
    Protein coding
    Short Description
    adenylate kinase 1
    Curator Summary
    encodes a protein similar to adenylate kinase.
    Computational Description
    adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 15080 Blast hits to 14911 proteins in 5099 species: Archae - 98; Bacteria - 9942; Metazoa - 1275; Fungi - 473; Plants - 468; Viruses - 0; Other Eukaryotes - 2824 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR