K38733

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38733

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38733

Determination of introduced cDNA(s)

  • J033087P16 - Rice Full-length cDNAs - Original: J033087P16

    full reading [+] show sequence

    Nucleotide sequence: J033087P16 - full reading
    GAAGCTTCTT GTAGACATAG ACAATTCTAA GAAGACAACT TCCATGGCCG 
    CTGCTACTCA ACCTCATGTC ATGGTGCTAC CGTTCCCTGC ACAAGGCCAT
    GTCATCCCAC TCATGGAGTT ATCTCATAGG CTTGCTGATC AAGGCTTCAA
    GATTGACTTC GTAAACACTG AGTTCAACCA CGACCGTGTC CTCAAGGCCT
    TGGCAGAGAA AGGAGCAATC CCTGGTGGAA TTCGCATGCT CTCCATTCCA
    GATGGATTGG ACCCTGCTGA TGACCACACA GACATCGGCA AGTTGGTTCA
    GGTCTTACCA GACGCTATGC TCAGCCCCCT GGAGAAGATG ATTAGATCCG
    AAAAGATAAA GTGGGTAATA GTAGATGTAT CCATGAGCTG GGCACTAGAA
    CTGGCTACCA CAATGGGTGT CCGTATTGCC TTGTTCTCAA CTTACTCCGC
    AGCTATCTTT GCACTCAGGA TGAACCTTCC TAAACTGATA GAGGATGGTA
    TTCTTGATGA AACTGGGAAT GTAAAGAAGC ATGAGATGGT CCAACTGATG
    CCACCTATTG ATGCAGCCGA GATCCCTTGG GTCAGCCTTG GCAGCACCCA
    AGAAAGACGG AGATATAACA TCCAAAATGT CTTTAAGACC AACCGACTAA
    TGGCACTTGC TGAAATGATC ATCTGCAACA CTTTCAGGGA GATAGAATCC
    GAAGCATTGG AACTCCTCTC AAATGCACTG CCTGTCGGCC CACTTTTAGC
    ACCTGCTTCG GGGCCAACAG GCCATTTCTT GCCTGAAGAC ATGACTTGCC
    TCACCTGGCT CGACACACAG GCCCCCGGCT CCGTTATCTA TGTGGCCTTT
    GGGAGCTCCA CCATCTTTGA CATAGCTCAG TTCCATGAGC TTGCTAACGG
    GCTTGCCGTC TCTGACCAAC CATTTCTGTG GGTTGTCCGA CCTAACTTTA
    CCAATGGAAT CCAAGAAGAT TGGTTCAATG AATATAAAGA CCGTATCAAG
    GGCAAGGGGT TGGTTATTAG CTGGGCTCCC CAGCAACGAG TACTATCACA
    CCCTTCAATC GCTTGCTTCA TGTCGCACTG TGGGTGGAAC TCAACAATGG
    AAGGTGTACT GCACGGTGTC CCGTTCTTAT GCTGGCCTTA TTTTTCCGAC
    CAATTCTGCA ACCAGAGCTA CATATGCAAT GTGTGGAAGA CAGGCATTAA
    GCTTTTCCGA GACAAGCAAG GGGTTGTCAC ACAGGAGGAG ATCAAGAACA
    AGGCGGCGCA GCTCCTAGAA GACAAGGAGA TCAAAGAAAG AGCGGTGACA
    CTGAAGACCA CGGCCCGTGC AAGCATCCAA GAGGGAGGGT CCTCGCACCA
    GAACTTTCTC GAGCTTGTCA ATTTGCTGAG AGAACAATGA TCTTTCAGGA
    TGCAGAAAAA ATCACTGCAG TCTTGGTGCA GTCAAAATAG GATTAATCGG
    TCAATAAAAT AAACCGAATG CACACCATAA TAAAGATTCC GTTGTTTGAT
    GC

    Gene models with high sequence identity

    1. AT3G02100.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 4e-88; Score: 322.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2e-56
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 2.5e-26
    Gene3D no description 0.0000000000000028
    Coil coiled-coil 0
    HMMPanther UDP-GLUCOSYLTRANSFERASE 9.6e-112
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 9.6e-112

    See the detailed result >

    AT3G02100.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Computational Description
    UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR