K39138

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K39138

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K39138

Determination of introduced cDNA(s)

  • J013089E18 - Rice Full-length cDNAs - Original: J013089E18

    full reading [+] show sequence

    Nucleotide sequence: J013089E18 - full reading
    GATCCTCCTC CCTCTCCCCG CCGCCGCCGT CAATCCCGAA TCCCGAGGGC 
    TCGGGTGGTC GTCGTCGGTC CGGGATGGCG GGGAGGAAGC GGAAGGCGGA
    GGCGGCGCGG GCGGCGGAGG AGGAGGCCGA CCGGGCGCTC TACGGCGCCT
    TCCGCGGCGC CGCCAACTCG CTCTCGCAGC TCTACGCGCT CGCCGGTGCC
    CACCAGCGCC TCTCCTTCCA CGCCGGTGAG CGCCACGCCT TGGAAAAACT
    CTACCAGTGG ATGGTGCGAC AGCATGAAAT TGGCTTGAGG CTCACAGTAT
    CTGACATAGC ATCCCACATC CAGCACGAGA TTGAGTATGG AGGTGACAAT
    GCATTAACTT CACCGAGATC GCAACACGCA TTCCAGAATC TCCAAGCTCC
    AATGCACATC CCCAACACAA GCACGCAGCA GCCGCCATCT TGTTCAATCA
    CACCATCAAA CCCTTCCAAG GACTCTATGA TATTTTCGAA AGCGCTATCC
    AGCCCTGTCC GGCAAAACCT GCAACTGTAC CATGTACAGC AATGCGGTGA
    CACAGGATGC TTTGCAGATG GCATTTTTTG CCCTGGAAAC GGTGACTCGG
    ATCCTGCAGC ATCAAATGAT TCGTCGGTGG ATATGCATTC AGATAGCCCA
    GGTCATGACT CATGAGCCCT GATTCCTGAA TGAGCAATTA CCATTTTCCA
    GTTTGATTCC ATGAACTGCA ATCAACAAAC TTGAAGTAAA GAAGTGGAAT
    TGCCCTCACG CAATCTGGGA TCTCAATTTA ATCCCTCACC CAAGTTAACT
    TGTAATTTGT AACTAGCTAT TGCCCAGTTA CCTCAGATAT AACGTGCACA
    TATATATCAT CCATGTATGT ACTTTCAGAT TATATAATAG CTGACGTATC
    AGTTTTTTAT GGT

    Gene models with high sequence identity

    1. AT4G09830.1 [+] show detail - Uncharacterised conserved protein UCP009193
      E-value: 2e-27; Score: 119.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G09830.1

    Model type
    Protein coding
    Short Description
    Uncharacterised conserved protein UCP009193
    Computational Description
    Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR