K39545

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	increased size (PATO:0000586) (Rosette leaf::Shape::large) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Others)
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K39545

Determination of introduced cDNA(s)

J013036F22 - Rice Full-length cDNAs - Original: J013036F22

full reading [+] show sequence

GTGCCATGGT GCCATGGCCG GCGACGAGGT GGATGCGCCG AAGGCTCTCC 
TCCCACCCAG ACCGGCCATC CTCGTGGCGA GCGCCGGTCA GCATCTACCA 
AGGTCCAAGG GCAAATGGTA CGCGCCGCCA TCGTACGGTC GATCTCGTCG 
TGCGCGTCCT GTTCGATGCC CCGACGCCGC TCGCCGCCCG TCCTCGCGGA 
CGCCGCCGGA GCCGGAGCCA CCGGTTGGTT TGGTAGACTT GTCCCCCTTC 
GCCTGCCTCC GCTTCACCTC GTCGACGCCT CACCCCACTT CGATTCCCAC 
CACCACTCCA CCAGCCGTCC ATACACCCCG ATCCCCAATC CCCAGTTCCA 
GTGAGGTCCA CTGCCACTTG CAGCTCGCCG GAGAGAAAAC GCGACAGGTT 
GGAACTGCAA GGTGGCGACC TGGAGGTCAG GGCAAGTCTC AGTGATCATC 
CGGTCATCGT GGATGCGTTG CAGGAGCGAG TTAATCCTGC TGCTCCGCTG 
CTCGCCAGTG CGGCGCTGCT TCTGCCTGGT GATCTCATCT AGCTTTGCAA 
ATCAAGCATG TGTTCCTGCA CCGATAAATC ATTGGTCTTG AAGCTGGAGC 
GATGGGGATG GAACCATCAA GGTTTTCCTT CCACGTGACC AGCATCGTCT 
TGGTAGACTC ATCAGGATGG CACCATACCA CTGAAGTTGT TGTGTGATAA 
GTCAAGGACC TCAAGATAAC ATTGGGTACA TATAGAACTT GGTATATGAC 
CACTTATTTT ATTCCTGGAA AAGCTAAGAT AGTAGACGTT TCGAAGATAC 
CTGCCGAAGT CACGAGTAAT TGAAGAGAAG CTGTTGCTAG AGTAATCCAA 
GAGAACACCA CCATCTCTAG TAGTTGTCAG TGGTATAGGT ACGTTACCAT 
GCAGTCTGTT GGAACTAAGA TTGAGTCTAT CTAAAGTGTG CAAGGGAAGA 
ACAGATGGAT TATTTTCCAA GCTAGTGAAC ATGTTGTTAG AGAGTACTAA 
CACGGACAAG CTATTCTTCC AGTTATCCCA TATCCAGCTT GGTATTACTC 
CATTTATTCT GTTGTTTGAA AGGTCCAAGT AAGACATACC TTTTATATCT 
CTCAATGCGC CTGGAATTTT TGTAAGGTTG CAAGATGCTA GTCCCAGGTA 
TTTGATTGTA GGGAAGTAAT GAAATGGATA GCCATCTTCT CGATCTATCA 
CCGACAACAT ATTGTTAGAG ATAATTAATG ATTCTAGTTT CTCCATCTTC 
CAAAGAAGGT TAATTTCCAG TGTACCATTC AATTGATTTG ATTGAAGCAC 
GAGATTTGTT AGTCTTCTAA GATCAAAGAA CGATTTGGGT ATGTAGCCTG 
TAAGGTGGTT ATAGCTTAAG TCGATGAATT CTAACAACGA GGAAAACGGG 
TCTGAAATGT CTTCTAGATG TCCAGAAAGT TGGTTTGATC GCAGATCTAG 
CATTTCCAAC GATTGATGAG CGAAAAGAAG CTTCGGGATT CTACCTGTGT 
GGATGAGGGA CAGAGAGAGA ACAACAGTCA AAGTTTGTTC AAAAAAGAAA 
AGCACAGAAT GTCAGAAGTC CTGATATATG TACTCAAATG TGTGTTCTTA 
CCGCTGAGGC TGTTAAGTGA AAGTTCCAAA TAGATAAGCT TAGTCAAGTT 
CCCAATCCAT GATGGTATTG GCCCATAGAA GCTGCAATTA AAGAGCACTA 
AAGATTCCAA ACTTGTACAG TTTCTGATCC AAGGGGGTAT TGGACTGGAG 
AAATTATAGC CTTCGAGCAT CAAGTCTCTC AGTTTAATTG TTCCAATCCA 
AGATAACAGT GGCTTCTCTA TGCCTGATCC AGAGAGCCAT AATGTATCTA 
GAGATGGAAG GCTAGGTATG AAAGTAGCAA CCTGCTTGGG AGATCCTACG 
TTGCTAAGGC CCAAAAATTT CAATGATTTG AGGTGGATAA ACGAGGCTGG 
CATGTTACCA GAAAAGTTTG TCCTCTGAAG ATTTAGTGAT TCCAAATATT 
TTCCAGGTGG GAAATCCGGA AGTTGGACAA AAAGAGTAGG ATTGAAAGAT 
ACATCAAGAG ACCTCAAATT TTCTACCTGG AATATCTTTG TGGGAAATTG 
CCCTTCAAAA TTATTGTTCG AGAGAGCAAG GTCACTCAAG AAAAAGAAGT 
CTGCAAAGAA CTCAGGAACC CTTCCAGAAA TTCCATTGTA GTTGAGGTTG 
ATCACCACTA GAGAGCGGAG TTGGGAAAAT GAACGATGAA TAGTTCCACC 
TAGGTCACAT TGGGACAAAC TAAGATTCTG CAGCAGAGGG AGAGAGTGTG 
CTAAAGCAAC GGACCAGGTT GGTTCACTAG TAATGCGCAC TTGATCAAGA 
TAGAGCTCTC TCAAATTGCT CAGGTTTGCT ACAATGGTTT GAAAACTCGG 
TTCTTGAAAA AACAGATAAT TGAAGGAAAG ATCAAGAGCA CGCAAATTCT 
TGAGATGTGC AATTCCAATG GGTATCTGAC CAAAGAAGCC TGCTTCTGAC 
AAATCGAGCC TGAGGAGTTT GGTGAGCCGC TGAAACCCGA AACTAGGAAG 
AACGGTCCGG TTGAAATCGT TACCAGCAAG GCTGAGGTTT CTCAGAGTGG 
TGAGGTTGAA GACCGCTGGG TCTAGGCCAC CGGGGCTCTG GAGATTATAG 
TAACTGAGGT CCAACGCTGT TACCTGCCCA GAGGATGTGT CGCAGGTGAC 
ACCCTCCCAG TGGCAACAGT CGGTGTTCAG TTTCCATGAC GAGAGGTTTG 
GATTAATGAA GGAGCTCTTC AGCTGGAGAA GCGCTTCAGC TTGGTGAGGA 
TGGCAATGAA CTGGGATGGT GGTGTTGGCA ACAGTTTGGA TGGAGCAGTA 
CAATGTGAGT AGCAGCAGTA TGAGGAGAAG CTGTGGTAGT GTGGATGCCA 
TCTCTGTATT GGTTTGCCAC TACACATAAC CACTTGGGTG GGTGGTTCTC 
AAGGTAATAT ATGTAGGTTA ATTACATAGG AAAAACAGTA GGTTTTAATT 
AAAAAGAAAA GGGAAAAGGC TGGCCTGTAC ATCATTAAAT TTTTATATTT 
GTTAGTATTT CCTCAATATG TTGCGTTCAA TCATCAATAT AACCTTTACC 
TGTT

Gene models with high sequence identity

AT3G05650.1 [+] show detail - receptor like protein 32
E-value: 5e-54; Score: 102.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KIN	3.7e-34
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	3.7e-34
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	3.4e-33
FPrintScan	Toll-like receptor, leucine rich repeat-containing	0.000025
FPrintScan	Toll-like receptor, leucine rich repeat-containing	0.000025
HMMPfam	Leucine-rich repeat-containing N-terminal domain, type 2	0.000000000000016
HMMPfam	Leucine-rich repeat	0.59
HMMPfam	Leucine-rich repeat	0.017
HMMPfam	Leucine-rich repeat	0.15
HMMPfam	Leucine-rich repeat	1.1
HMMPfam	Leucine-rich repeat	0.17
superfamily	L domain-like	1.5e-57
superfamily	L domain-like	7.7e-38
Gene3D	no description	6.4e-47
Gene3D	no description	9.6e-21
Gene3D	no description	2.4e-27
Gene3D	no description	0.0000024

See the detailed result >

AT3G05650.1

Model type: Protein coding
Short Description: receptor like protein 32
Computational Description: receptor like protein 32 (RLP32); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 35 (TAIR:AT3G11080.1); Has 113074 Blast hits to 30005 proteins in 1111 species: Archae - 53; Bacteria - 9058; Metazoa - 26342; Fungi - 1162; Plants - 67072; Viruses - 12; Other Eukaryotes - 9375 (source: NCBI BLink).
Link: InterPro Scan - TAIR