K40507

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K40507

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • present in greater numbers in organism (PATO:0000470)
    (Cauline leaf::Number::many)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
stem internode (PO:0020142)
  • decreased length (PATO:0000574)
    (Stem::Shape::short internode)
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: K40507

Determination of introduced cDNA(s)

  • J023078E13 - Rice Full-length cDNAs - Original: J023078E13

    full reading [+] show sequence

    Nucleotide sequence: J023078E13 - full reading 
    GTCGGATCGA GAAAAAAGCG AAAGGACCTC TTGACCCCCC AACCACACCG 
    AGGCCGCCGC GGAGGAGGAG GAAGAGGAGG AGATCGAGGA TGTTTTTCAG 
    CCGCTTCGAT CCGTGGCCGG TGTTCTTCCG GAGGGAGTGG AAGCGCTGCT 
    GGCCCTTCCT CACCGGCTTC GCCGTCACCG GCGCCATCAT CACCAAGATG 
    ACCGCCGGCT TCACCGAGGA GGACCTCAAG AACTCCAAGT TCGTCCAGGC 
    GCACAAGAAG CACTGATCTG ATCCGTGCCT CCATGGTAAA TCCCCCCGCG 
    CGCCTCCTTC CTCGATCTCG TCTCCCCTCC GGCTGAGATC TGGTTCTTTC 
    CGCTGTCCTG CGGTAGATCT GGTTTGTAGA AACTATTTGG GGGTTATTAT 
    TGTTTGTTCC TGCTTTAAGC TGGGCATGGT ATGGTGTGAT TTGGTTTCGA 
    TTTGAATCGA ATCGCTAGGA TTGCAGCAAC ATCACTTCCC GCGAAACGGG 
    AGAGTAATTT GGGGGGAATC AGGAGATAGG ATTAGGGGGG AAAATGTAGG 
    AATCTTCTGG CGGCACATTC TCTATGATGT GATTATTAAT TAGTCCATGA 
    AGGTGAGGAT TAGGCAACTT TGCTCATCGA TATTGCTCCG TGATCAAGAT 
    AGCCTAAGTT TTCTGAAAAA TGCATTAAGG GCATAGCAAG TGGCTAATTC 
    TTAAAGCATG GTTGAGAGTA CAATTCAACT TCTTTTTTGT AGACAGATGT 
    GCTTTTGTAG CCTGTTTCCT TTTGAAGGGT AGCAGAAAGT CCCGATTGTT 
    CTTAGTGTGC TAATTTTACC TTCTAAACTT GGAAGAATGG AACATACGCA 
    AATGATAAAT GTGCTTCTTT ACATCCAGGC ATTCGTAATC AGTATGAAAA 
    GGATGCAGAA TACATTGACG CTACATTTTA TAAATAAGGT TTTCTTTTCT 
    AAGAGAAAGA AGGGTGCGAA GGAAAATAAT GCTGCGTTCC AATCCTATTC 
    ATAATATTAG GGGAATGCTA CAGGACGGTA TCCCGTTCGG ACAGGATGAT 
    ACCTCAGAGG TATCGTCTGA TACCCAGGTA TGCCAATACC TAGTAGGTAT 
    TGGCGATACC TTGAGGTATC ATCATGTCCA AACGGGGTAT CAGCCGATAC 
    CTTAGGTGAT CATCCCGTCT GAACGGGAAA CCGTCCCGTA GCATTTCCCT 
    AATATTATTG TGATACGTCT TGGAACATAA TGTTTGGGCA GTACATAGGG 
    ATTACTATTT AATAATATAC GAATGTTGAA AAATAGTTTC ATGCAAAAGT 
    TGGAAAGGGT GTATGAAATG CTGTAATACG GAAGGAAAGG TGGTTCTTAC 
    TCCACGAACG CATTTTCTAG ATATTTATAT CAATAAAATT TCCTCAATCA 
    AGGTGCTCAT GTACCTGTAG ATCCGTTTAT TGTTGCTTCC CTTTTATTTT 
    TCAAACAAAA GCTGATCACA TATCAATTTC TAAACCAGCT AACTGTGATT 
    TAAATTTTTG TTGAGTATTG CACAAGGGAT TCCAATCACT AATGTAAATG 
    TCTTGTATCC TTGTAATTCA AACCTATCTG ATGCTTCAGA GCCCAACTAA 
    TTATGATCAA ACCACTGTTT GGAGTTACTG TATATGGTTC CTTCCACATC 
    AATGGTATTT TTGCCACTCA TGGGTGTTGT ATACTTTCTG GGGCTGGGAG 
    TATTATCTCA GAAACTGTTA TTGTATTGAC CTGGCTGGCT GGCTATATGC 
    CCTACTCTGT TTGATTTTAT CAGCAGCTCA TATTACCTTC AGCACGCTCA 
    AATTGTTAAC ATCTGTGAAT GTGTATTTGT TTATTGAGGT ACTTAAGGAT 
    TCATTGAGCA AATTTGTTGT CCATTGGACA CAAGCTTATC TTAGTGTGCT 
    TCCAGAAAAA AAAATGTTTT GTCAATGTGA ACTTTTTTTG TGAATGTTTT 
    GAATTGTGCA TTTCTGCTAT GCACTGCAAT GATCAAATCA AGCTGTACAG 
    CTGCTGCTTT TGTTTGTAAT TGTTTTGAAG CCCTAAGGGA ATTGCTGTTG 
    TTATTTTTTC TAGAACCATA GGTAGCAAGT AAAAACATGA AGGCAACATC 
    ATTCATACTC TTTGCTTGAT AGTCATTTGG CGTATTTTGT AAAATTTGGA 
    AACCTTTCTT TGCATGCATG ACATGTCAAA TTGGAGTTCC TAATTTCAGG 
    TATCCTGTTT ATGGAAGTAC TTACTTTGCT TAACCTTACC ATATCTGCAG 
    GTGAAGGAAC AGCTGGTATT GCCTAAGTCT TCAGTTTGGC CTATTTTTCT 
    GTTCCAAATG AACCTACCTG TTTTTTGTTT ATCCATTTGG GTGGACAACC 
    GCTCCAGTTG TATCTAATAA GAGGCGTTTG AATCTTTGGA CCAAAAAATT 
    TGAGCTTCTG GTATAAACCT GTAATACTCT TCAAGTG

    Gene models with high sequence identity

    1. AT5G59613.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-22; Score: 103.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G59613.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
    Link
    InterPro Scan - TAIR