K41543

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small) abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide) present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K41543

Determination of introduced cDNA(s)

J013088I21 - Rice Full-length cDNAs - Original: J013088I21

full reading [+] show sequence

GTCTGCTTCT TTCCTCCGAC GACTCGCCGC CGCCTGAAAT CTCTTTCTTG 
ATTCGTGCGC TCCTGAGCTA CCCCGATGGC CGCCCAATCT TCCACTCCCT 
CGCCGCAAGA TGGTTCTGGT AGAGGTGAAT TCTCAGACAA TTTGGTACTT 
CAAACCCCAC AGCCAATGCG GGAGGATTAC ATACAGAATG CTGTTAACTT 
TCTTGGACAT CCAAAAGTGA AGGGTTCTCC AGTATTTTAC AGGCGCTCTT 
TTCTGGAAAA GAAAGGCCTT ACAAAGGAAG AAATCGACGA GGCCTTCCGT 
CGGGTTCCTG ATCCACAGCC AAACAGTACA GATGTTGCAG CTGTTGCTTC 
ACAACAAGCC GGCATCGCAA ATCAATCTGC TGGAGTACAA CCTTACGAGA 
CAGTTCAAGC ACCACAAGCC ATTAACACTG GTCCTATCGT TCCACATGCG 
CAGCCGCAAC TTAGCTGGTC CCGTACTCTC ATTGGTGTAG GTGTTTTCCT 
CGGAGTTGGG GCTAGTGCTG CTGTCATCCT CAAGAAATTG TTTGTTCCTA 
GGCTAAAATC TTGGATCCAA GGAGCCCATG TTGAAGGGGA TGAAATTTCT 
GGGAATGAAC TTAAATCCAA GTTTTATGAA GAAATCAAAG CAGCCATACA 
AGATTCTGCA TCAGCGTTTT CTGATATTGC TAAAACAAAC CAAGAGTTGC 
TTGCTTCAAA GGATGAAGAT AAGAAGATAC TTACAAAGTT GGCACAAGCA 
TTTGATTCGC AAGCAGAGGC GTTTAGATCC TTGAGTGATT CCTTGAATCG 
TATGAGTGAG AATAGGTTTT ACCAGTACAA TCTAATGGAG GATCATTTTC 
AATCTGCCCC ATGGAATGGG CCAACTACAA ATTCATGGAG AGCTTCTCAG 
CAAACAAACG CATACAACAC ATCACCACGC AGTGATTTTG ACTCCGGGAG 
GCATCCGTTC ATGCCAGTAC CGGGAGAACC TTCACCTGGA GCATTTCCGG 
CGAGATCCTA TGTTGAGCAG CAGCGGATGC AGAGGCCTGG GTACGGATTT 
CAGCCTCAGA TGAGCAATGA CAGGTGGAAC CCTGGCTCGC CATTGACGAA 
CTACCACGGT GCTCCTCCGT ATCAGCAGTA TCACCATGGA TCCACCAACG 
CCATCGATGA AGCTCCAGCT CCAGCTCCAG TTCCAGCTCC AGCTCCACCA 
GCTGAAAGCC CGTTCCAGCG TCGCTGGGTT CCCCCACAGC CACCGGGCGT 
CGTCATGCCG GAGGCCGTGG CCGCCATACG GCAGCCGAGG CAGCAAGTTG 
CAGCGGCATC GAGACCGTCG GAATCCGCCG CGGCGACAGA GCAGCCACAG 
TCAGGTGACG TCGCCGGTGG CGCCGCCATG GCCAATGCGG GCAATGGCGA 
GGCCGAGCAA GAGCGGGAAG CTGCTGCTTA ATTACTCCAT TTCTTTTTTT 
TTTGTTTGCC ACGCGATGCA TGCGTCTCTC GTGTACAAAA TACAGACTAG 
TGACGATTAC CTATGAGAAA AAGAAGAGGA ACAAATGTTG TGTATTC

Gene models with high sequence identity

AT5G62810.1 [+] show detail - peroxin 14
E-value: 1e-48; Score: 191.00

InterPro Scan Digest

See the detailed result >

AT5G62810.1

Model type: Protein coding
Short Description: peroxin 14
Curator Summary: mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2)
Computational Description: peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link: InterPro Scan - TAIR