K41745

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K41745

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
stem internode (PO:0020142)
  • decreased length (PATO:0000574)
    (Stem::Shape::short internode)
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K41745

Determination of introduced cDNA(s)

  • J013067B14 - Rice Full-length cDNAs - Original: J013067B14

    full reading [+] show sequence

    Nucleotide sequence: J013067B14 - full reading
    TTTTTTTCCA GCTGTATGAA ATAATATACC GAATTTAGGC TGCTTCCTGA 
    TTTCACTCTG TATCATCTTG GAATTAAATT TAGGATTTGG TCCTGCCGAC
    AATACCCATA ATTAGTCCAA CTCCAGCACG CCGGATTGCC GGAAGGTTGG
    CGACGCGTTA TCATTGCCCA GGCCTGCTGC CCCTTCTCCC CTCCTTCTCC
    TTGGTGAATC GTCGGCGATG GATATCGCTC TTGCTTCTGC GGCGGCGACA
    TGGCTGATCA ACAAGCTCCT GGACCGGCTG AGCGACTATG CCATCAAGAA
    GCTGCTGGGC TCGGAGGGCC TGGACGCGGA GGCCAGCTCC CTCAGGGATG
    CGCTGCGGCG AGCCACGCTC GTCCTCGGCG CCGTGCCCGC CGGTGCCGCC
    GCAGGGGTCA GGATTGGGAA CGACCAGCTA CTTCCGCAGA TCGACCTGGT
    TCAGCGGCTA GCCACCGATT TGGCCAGGCA CCTCGACGAG CTCGAGTACT
    ACGACGTCAA GAAAAAGGTA AAGAAGAACC AGAAGAGCAG CAATCCATTA
    TCCAAAATGA ATTTACCCCT TACTCAAGCT GGGCAATCAA AGCCGAAGTA
    CAATAGAACA GACATAAAAC AGATTAGAGA TACTGTGGGA TATTTGCATA
    GCATTTGTGA TGATGTTCAC AAGGCTCTCT TGCTAGATAA ACTTGATGCA
    ATTAAACAAG CTGCTCAAGA TGCAAGTACA GACAAACGTG AGACTGTGGA
    TAACTTCACT GAAAATCCTA GAAATAAGGT GTTCCCAAGG GAAGAAATGA
    AAGATATTAT AGAACTAATT AATAGTGCTG CATCGAGTGA TCAAGAACTT
    TTAGTTGTTC CAATAGTTGG TGCTGGTGGT GTTGGGAAGA CAACACTTGC
    TCGATTGGTG TACCATGACC CAGAAGTAAA AGATAAATTT GACATCATGC
    TCTGGATCTA CGTATCTGCT AACTTTGATG AAGTTAAGCT TACACAAGGG
    ATTCTGGAAC AAATACCTGA ATGTGAGTTC AAAAGCGCCA AGAATCTCAC
    TGTGCTTCAG CGTGGTATCA ACAAATATTT GACCAAAAGA TTTCTGCTTG
    TTCTGGATGA CATGTGGGAA GAGAGTGAGG GTCGTTGGGA CAAGTTATTG
    GCCCCACTTA GATCCGCACA GGCTAAGGGT AACGTACTCT TGGTAACTAC
    TCGGAAGTTA TCGGTGGCTA GGATAACTAG CAACACAGAA GCACACATTG
    ACTTGGATGG TATGAAAAAA GATGACTTCT GGTTATTCTT CAAAAGATGC
    ATATTTGGTG ATGAAAACTA TCAAGGCCAA AGGAAGCTAC AGAATATTGC
    TAAGAAAATA GCCACCAGAC TGAATGGCAA TCCATTGGCA GCAAAAAGTG
    TTGGTACACT TTTGAGAAGA AATATTAATG AGGATTACTG GACAAGAATT
    CTAGATAGCA ATGAATGGAA GTTACAAGAA AGTATTGATG ACATTATACC
    TGCACTAAAG CTCAGTTACA ATCAGCTTCC CTATCGTCTT CAGCTACTCT
    TCAGTTACTG TGCTATGTTT CCAAAGGGTT ACAATTTTGA CAAAGGACAG
    TTGATATGTA CATGGATTGC TCTGGGATTT GTCATGAATG AGAGAAAGAA
    ATTGGAGGAT GAAGGAAGTG ACTGTTTTGA TGATTTGGTA GACCGAAGCT
    TTTTCCAGAA ATATGGAGTG TCACAGTATT ATACTGTGCA TGATTTAATG
    CATGATGTTG CACAAGAAGT CTCCATTAAC AAATGCCTTA TTATTGATGG
    GTCAGATCTT CGAACAGTTC CGTCGTCCAT TTGTCACCTT AGCATCTGGA
    CTGAGCCGGT GTACAATGAG CAAAGCATAG AACGGAATGA TAACTTTGAA
    GAGAAGTTAG ATGCAGTCCA GGATAATGTC TTGGGAAGCT TGGAGTGTTT
    AATTCTTGCA GGTGTATATG ATGAGAACTA CTCTGCTAAG TTTGTGAAGA
    CTCTTGAGCG AGTACGTTAT GTCCGGATGC TCCAGTTAAC AGCAATGCCA
    TTCAATTCTG ACATTCTACT ATCCAGTATA AAGAAGTTAA TCCATCTTCG
    CTACTTAGAA CTGAGGTGTA CGTCGGATAA GCCCAAATCT TTGCCTGAGG
    CTATATGTAA GCTCTACCAC CTACAAGTAC TAGATGTTCA ACATTGGAGT
    GGTCTAAATG ATTTGCCAAA GGATATGAGT AATCTTGTGA ACCTACGCCA
    TCTGTTTGTT CCGGGGTCAG GATCATTGCA CTCCAAGATA TCCAGAGTTG
    GGGAACTTAA GTTTCTACAA GAACTGAAAG AATTTCAGGT TCAAGAAGCC
    GATGGCTTTG AGATTTCACA ACTCGGGAAC ATAAATGAAA TCAGAGGATC
    ACTTAGTATC CTTGGCCTTG AGACTGTCAA AAAGAAGGGA GATGCAACTC
    GTGCAAGGCT TAAAGACAAA AAACACCTGA GGACACTTTC ACTAACATGG
    GGGAGTGCAA GCGGAAGTAC TACTACCGTC CAGAAAGAAG TGATGGAGGG
    TCTTAAACCA CATGAAAATC TTTCCCATCT TCTTGTCTAC AATTATTCTG
    GTGCTACTCC ATCATGGTTA TTAGGAGATA GTTTCTCACT TGGCAATTTA
    GAAAGCCTCC ATCTCCAGGA TTGTGCAGCA GTGAAGATCC TTCCACCATT
    TGAGGAGATG CCATTCCTGA AGAAGCTGTC CTTGGTTTGT ATGCCCTGTC
    TGAAAAGTAT CAGGATTGAC TTCAACTCTG CCGATGAGGA GGATGAACTT
    GAGTTAAGCG AAATTGAAAT ATCCAAATGT TTAGCTTTAA CATCCATAAG
    ACTACATTCC TGCAAGGCGT TGACTATGTT AAGCATCAAT GATTGTGAGG
    CACTAGGTTC CTTAGAGGGC TTGTCATTTT CTGAAAAACT GAAGCAGTGT
    GTTGTCCAAG GATGCCCAAA ACTTCCGTCA GGTTTCATCG CAAACTGATG
    ATTTGGTGGC AAACTCTATC AAACTAGCTA CCAAAGAAGA GGAGGGAACC
    GGGATGTGGA CGACCTTGTT TCTGCTGAAA AAGGCATGTT TTAACTTCTG
    TCAGTGGAGG CAGCTTGGAC GCTTACTAGT TCGTGCTGTA TCGTTGTGGT
    TTTTGCTGTT GTATTCACTA TTATTTTCGT ATACTTTATT GTCATTTTAT
    TCACACTACC ATATATGGAA ATGTTGTGCC TGATGTGTAA TATTTCGGTA
    GGCACACCGG CTAAAACATT AAATGGTCTT AAATACCATG GGAACACATC
    TGCCCTTCTA TGTTACCCAG ATAAATACAT TGTTATTTTG TGATTATAAT
    TGTAAGGCCG CAATGAAGAT TTGTGCTATA TATTC

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 3e-91; Score: 334.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Gene3D no description 1.1e-06
    superfamily L domain-like 2.5e-25
    superfamily P-loop containing nucleoside triphosphate hyd 2.3e-15
    HMMPfam NB-ARC 2.5e-64
    FPrintScan Disease resistance protein 7.4e-14
    FPrintScan Disease resistance protein 7.4e-14
    FPrintScan Disease resistance protein 7.4e-14
    FPrintScan Disease resistance protein 7.4e-14

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR