K41745

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K41745

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
stem internode (PO:0020142)
  • decreased length (PATO:0000574)
    (Stem::Shape::short internode)
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K41745

Determination of introduced cDNA(s)

  • J013067B14 - Rice Full-length cDNAs - Original: J013067B14

    full reading [+] show sequence

    Nucleotide sequence: J013067B14 - full reading 
    TTTTTTTCCA GCTGTATGAA ATAATATACC GAATTTAGGC TGCTTCCTGA 
    TTTCACTCTG TATCATCTTG GAATTAAATT TAGGATTTGG TCCTGCCGAC 
    AATACCCATA ATTAGTCCAA CTCCAGCACG CCGGATTGCC GGAAGGTTGG 
    CGACGCGTTA TCATTGCCCA GGCCTGCTGC CCCTTCTCCC CTCCTTCTCC 
    TTGGTGAATC GTCGGCGATG GATATCGCTC TTGCTTCTGC GGCGGCGACA 
    TGGCTGATCA ACAAGCTCCT GGACCGGCTG AGCGACTATG CCATCAAGAA 
    GCTGCTGGGC TCGGAGGGCC TGGACGCGGA GGCCAGCTCC CTCAGGGATG 
    CGCTGCGGCG AGCCACGCTC GTCCTCGGCG CCGTGCCCGC CGGTGCCGCC 
    GCAGGGGTCA GGATTGGGAA CGACCAGCTA CTTCCGCAGA TCGACCTGGT 
    TCAGCGGCTA GCCACCGATT TGGCCAGGCA CCTCGACGAG CTCGAGTACT 
    ACGACGTCAA GAAAAAGGTA AAGAAGAACC AGAAGAGCAG CAATCCATTA 
    TCCAAAATGA ATTTACCCCT TACTCAAGCT GGGCAATCAA AGCCGAAGTA 
    CAATAGAACA GACATAAAAC AGATTAGAGA TACTGTGGGA TATTTGCATA 
    GCATTTGTGA TGATGTTCAC AAGGCTCTCT TGCTAGATAA ACTTGATGCA 
    ATTAAACAAG CTGCTCAAGA TGCAAGTACA GACAAACGTG AGACTGTGGA 
    TAACTTCACT GAAAATCCTA GAAATAAGGT GTTCCCAAGG GAAGAAATGA 
    AAGATATTAT AGAACTAATT AATAGTGCTG CATCGAGTGA TCAAGAACTT 
    TTAGTTGTTC CAATAGTTGG TGCTGGTGGT GTTGGGAAGA CAACACTTGC 
    TCGATTGGTG TACCATGACC CAGAAGTAAA AGATAAATTT GACATCATGC 
    TCTGGATCTA CGTATCTGCT AACTTTGATG AAGTTAAGCT TACACAAGGG 
    ATTCTGGAAC AAATACCTGA ATGTGAGTTC AAAAGCGCCA AGAATCTCAC 
    TGTGCTTCAG CGTGGTATCA ACAAATATTT GACCAAAAGA TTTCTGCTTG 
    TTCTGGATGA CATGTGGGAA GAGAGTGAGG GTCGTTGGGA CAAGTTATTG 
    GCCCCACTTA GATCCGCACA GGCTAAGGGT AACGTACTCT TGGTAACTAC 
    TCGGAAGTTA TCGGTGGCTA GGATAACTAG CAACACAGAA GCACACATTG 
    ACTTGGATGG TATGAAAAAA GATGACTTCT GGTTATTCTT CAAAAGATGC 
    ATATTTGGTG ATGAAAACTA TCAAGGCCAA AGGAAGCTAC AGAATATTGC 
    TAAGAAAATA GCCACCAGAC TGAATGGCAA TCCATTGGCA GCAAAAAGTG 
    TTGGTACACT TTTGAGAAGA AATATTAATG AGGATTACTG GACAAGAATT 
    CTAGATAGCA ATGAATGGAA GTTACAAGAA AGTATTGATG ACATTATACC 
    TGCACTAAAG CTCAGTTACA ATCAGCTTCC CTATCGTCTT CAGCTACTCT 
    TCAGTTACTG TGCTATGTTT CCAAAGGGTT ACAATTTTGA CAAAGGACAG 
    TTGATATGTA CATGGATTGC TCTGGGATTT GTCATGAATG AGAGAAAGAA 
    ATTGGAGGAT GAAGGAAGTG ACTGTTTTGA TGATTTGGTA GACCGAAGCT 
    TTTTCCAGAA ATATGGAGTG TCACAGTATT ATACTGTGCA TGATTTAATG 
    CATGATGTTG CACAAGAAGT CTCCATTAAC AAATGCCTTA TTATTGATGG 
    GTCAGATCTT CGAACAGTTC CGTCGTCCAT TTGTCACCTT AGCATCTGGA 
    CTGAGCCGGT GTACAATGAG CAAAGCATAG AACGGAATGA TAACTTTGAA 
    GAGAAGTTAG ATGCAGTCCA GGATAATGTC TTGGGAAGCT TGGAGTGTTT 
    AATTCTTGCA GGTGTATATG ATGAGAACTA CTCTGCTAAG TTTGTGAAGA 
    CTCTTGAGCG AGTACGTTAT GTCCGGATGC TCCAGTTAAC AGCAATGCCA 
    TTCAATTCTG ACATTCTACT ATCCAGTATA AAGAAGTTAA TCCATCTTCG 
    CTACTTAGAA CTGAGGTGTA CGTCGGATAA GCCCAAATCT TTGCCTGAGG 
    CTATATGTAA GCTCTACCAC CTACAAGTAC TAGATGTTCA ACATTGGAGT 
    GGTCTAAATG ATTTGCCAAA GGATATGAGT AATCTTGTGA ACCTACGCCA 
    TCTGTTTGTT CCGGGGTCAG GATCATTGCA CTCCAAGATA TCCAGAGTTG 
    GGGAACTTAA GTTTCTACAA GAACTGAAAG AATTTCAGGT TCAAGAAGCC 
    GATGGCTTTG AGATTTCACA ACTCGGGAAC ATAAATGAAA TCAGAGGATC 
    ACTTAGTATC CTTGGCCTTG AGACTGTCAA AAAGAAGGGA GATGCAACTC 
    GTGCAAGGCT TAAAGACAAA AAACACCTGA GGACACTTTC ACTAACATGG 
    GGGAGTGCAA GCGGAAGTAC TACTACCGTC CAGAAAGAAG TGATGGAGGG 
    TCTTAAACCA CATGAAAATC TTTCCCATCT TCTTGTCTAC AATTATTCTG 
    GTGCTACTCC ATCATGGTTA TTAGGAGATA GTTTCTCACT TGGCAATTTA 
    GAAAGCCTCC ATCTCCAGGA TTGTGCAGCA GTGAAGATCC TTCCACCATT 
    TGAGGAGATG CCATTCCTGA AGAAGCTGTC CTTGGTTTGT ATGCCCTGTC 
    TGAAAAGTAT CAGGATTGAC TTCAACTCTG CCGATGAGGA GGATGAACTT 
    GAGTTAAGCG AAATTGAAAT ATCCAAATGT TTAGCTTTAA CATCCATAAG 
    ACTACATTCC TGCAAGGCGT TGACTATGTT AAGCATCAAT GATTGTGAGG 
    CACTAGGTTC CTTAGAGGGC TTGTCATTTT CTGAAAAACT GAAGCAGTGT 
    GTTGTCCAAG GATGCCCAAA ACTTCCGTCA GGTTTCATCG CAAACTGATG 
    ATTTGGTGGC AAACTCTATC AAACTAGCTA CCAAAGAAGA GGAGGGAACC 
    GGGATGTGGA CGACCTTGTT TCTGCTGAAA AAGGCATGTT TTAACTTCTG 
    TCAGTGGAGG CAGCTTGGAC GCTTACTAGT TCGTGCTGTA TCGTTGTGGT 
    TTTTGCTGTT GTATTCACTA TTATTTTCGT ATACTTTATT GTCATTTTAT 
    TCACACTACC ATATATGGAA ATGTTGTGCC TGATGTGTAA TATTTCGGTA 
    GGCACACCGG CTAAAACATT AAATGGTCTT AAATACCATG GGAACACATC 
    TGCCCTTCTA TGTTACCCAG ATAAATACAT TGTTATTTTG TGATTATAAT 
    TGTAAGGCCG CAATGAAGAT TTGTGCTATA TATTC

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 3e-91; Score: 334.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Gene3D no description 0.0000011
    superfamily L domain-like 2.5e-25
    superfamily P-loop containing nucleoside triphosphate hyd 0.0000000000000023
    HMMPfam NB-ARC 2.5e-64
    FPrintScan Disease resistance protein 0.000000000000074
    FPrintScan Disease resistance protein 0.000000000000074
    FPrintScan Disease resistance protein 0.000000000000074
    FPrintScan Disease resistance protein 0.000000000000074

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR