K43701

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K43701

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K43701

Determination of introduced cDNA(s)

  • J013082M21 - Rice Full-length cDNAs - Original: J013082M21

    full reading [+] show sequence

    Nucleotide sequence: J013082M21 - full reading 
    GCTATTCCTC CTCCTCGCCA AGCCAGCGGA ATTTTCCCCC AAATCCACCG 
    CGTCGCCATG GCCGCCGCCG CCGCCCGCCT CCTCCTCCTC GCCGTCGTCG 
    CCGCGGTGTT CCTCCTCTCC CCCGCGGCAG CCGGGCGCCC CTGCGGCCAC 
    GCCCAGACGC TCCTCATCTC CTTCTCCTCC GTCTCCAGGC CCAACCCCGA 
    CCCCAACAAC CCCACTCCCC TCACCACCAC CGTCGTCACC GTCCTCCGCG 
    TCCGCCGCCT CGGCCCCCAC CACCCCCTCC AGATCCCCCG CCCCGATCCC 
    CTCCCCGCCG CCTCCGACGC CGCCTCGTCC GTCCAGGAGC GCGCCAAGGA 
    CATCCTCGTC GTCGTCTCCG GCCTCCTCTT CGGCTTCGGC TGCGGCGCCC 
    TCACCGCCGC GACCATGTAC CTCGTCTGGT CCCTCCTCGC CTCCACCTGC 
    GCTCCTTCCT ACGACGAGGT CTACGGCGAA GACGACGACG ACGAGCTGTC 
    CGACTCCGAG AGCCCCAAGA AGGCCGGATA CGTCATCATC CACGACGCCG 
    AACAGTACGT CGGCGGTAAG AACTAGGGGT GGGGAATTGG GCTATCTCGC 
    CGATGGCCAA TTTAAGAATT TGTGATAAAT GATCGCGTGG ATTTGCGGGG 
    TATATATACT ACTATTAGCA CCTATATATG TGTTGCGTCT GTCTGACTCA 
    GTATGTGTGT GTGATTTCGA AAAGAAACAA ATTATGAATA CGGTCTTGAT 
    GTTTTCTTAC ATAATTTAAA GTGAAACTGA AGTGTCCTTA TTTATTGATC 
    ATGAAACATG GAACATATTT GGTTCTTCTG C

    Gene models with high sequence identity

    1. AT1G65720.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-08; Score: 55.50

     

    InterPro Scan Digest

    See the detailed result >

    AT1G65720.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR