K43701

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K43701

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K43701

Determination of introduced cDNA(s)

  • J013082M21 - Rice Full-length cDNAs - Original: J013082M21

    full reading [+] show sequence

    Nucleotide sequence: J013082M21 - full reading
    GCTATTCCTC CTCCTCGCCA AGCCAGCGGA ATTTTCCCCC AAATCCACCG 
    CGTCGCCATG GCCGCCGCCG CCGCCCGCCT CCTCCTCCTC GCCGTCGTCG
    CCGCGGTGTT CCTCCTCTCC CCCGCGGCAG CCGGGCGCCC CTGCGGCCAC
    GCCCAGACGC TCCTCATCTC CTTCTCCTCC GTCTCCAGGC CCAACCCCGA
    CCCCAACAAC CCCACTCCCC TCACCACCAC CGTCGTCACC GTCCTCCGCG
    TCCGCCGCCT CGGCCCCCAC CACCCCCTCC AGATCCCCCG CCCCGATCCC
    CTCCCCGCCG CCTCCGACGC CGCCTCGTCC GTCCAGGAGC GCGCCAAGGA
    CATCCTCGTC GTCGTCTCCG GCCTCCTCTT CGGCTTCGGC TGCGGCGCCC
    TCACCGCCGC GACCATGTAC CTCGTCTGGT CCCTCCTCGC CTCCACCTGC
    GCTCCTTCCT ACGACGAGGT CTACGGCGAA GACGACGACG ACGAGCTGTC
    CGACTCCGAG AGCCCCAAGA AGGCCGGATA CGTCATCATC CACGACGCCG
    AACAGTACGT CGGCGGTAAG AACTAGGGGT GGGGAATTGG GCTATCTCGC
    CGATGGCCAA TTTAAGAATT TGTGATAAAT GATCGCGTGG ATTTGCGGGG
    TATATATACT ACTATTAGCA CCTATATATG TGTTGCGTCT GTCTGACTCA
    GTATGTGTGT GTGATTTCGA AAAGAAACAA ATTATGAATA CGGTCTTGAT
    GTTTTCTTAC ATAATTTAAA GTGAAACTGA AGTGTCCTTA TTTATTGATC
    ATGAAACATG GAACATATTT GGTTCTTCTG C

    Gene models with high sequence identity

    1. AT1G65720.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-08; Score: 55.50

     

    InterPro Scan Digest

    See the detailed result >

    AT1G65720.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR