K45150

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K45150

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K45150

Determination of introduced cDNA(s)

  • J013091C23 - Rice Full-length cDNAs - Original: J013091C23

    full reading [+] show sequence

    Nucleotide sequence: J013091C23 - full reading 
    GGCTTCTTCT TCTTCTTCTT CTTCTTCTTC TTCTTCTTCT TCTTCTTCTT 
    CTTCTTCTTC TTGTTTGTGG TTTGAGGCGA TTACAACGCG AGTTCGCCGT 
    TCTGCGAGGG CGGTGGCTGA TCCGTCTGCT GGGATCTACG TTTTCTTCGC 
    GGTTTCGGTG GATTTTGCGG GGGTTTCGGG GATTCTTGAG ACGTCGGTGT 
    GTTGCGGTTG TGTTCAAACC TCCCAAGCGC GTGGATTCTT TTTGGGGGGT 
    CTCTAATTTG TGTCGGCGAT TAGTCAACGT GGAGCAATTA TACGGATTTC 
    CGAGGGATTT TCTGGTATTT ATTGCTGCAA ATCGGGCAAG TTCTTGGCTT 
    CGGATGGGGC TTGGAGTAAA GATAGATCAT TTACGCCATA GATTCGTACC 
    CAAATGCTCA GTTTTTTTTA TTGGTTTGCA CTTTCCCCTT CGTTAGAGGC 
    TCGTATGCTC GCGCCTGCCT CATAGCAGAT GCGGATGAGT TCAAACTCAA 
    GAATAGATGC AGAAGAGAGC CTGAATCAGG AGGAGTTCGT CAAGAAACGT 
    GAACAGGGTG CAGGGATCCC TATTTTGGCT TGATTGAAGG CGGTTTTGGA 
    GGGGGAAAGT TGCTTAGCTG AACAACATTT TTGCGCATAG CAGCAAACTG 
    TTGCTTGTGT TGGAGCCGAC GGCAATGAAA GAATGCCTTT TTTGTAGCTG 
    GTTTTGGACA TAAAGAGTAT TTTTTATGGT TGCTTTCTTG CTAAAAATAT 
    GGTGTTTTAG TGCAAGTCAT TCAGTGTAAA TCTCCAAGCA TTCTTATATA 
    CTTGTTCCTT TTCCTCCTCC TGGATGAGTC TTGGATGAGT GCATTTCTCT 
    CTGTTCATCT CTTTGCTCTT CACCTGATGA TTGTTTCATG GTGGATGCGT 
    GTTAGATGCA CTGAGTTGCT TAGCATGGTG AATCAGTGCT TTGTGAACTG 
    CGTGGTTCCA CTTTTTAACT GATGTTTGTT ATTGACGATC TCGCAGGTTG 
    ACCGATAGAT CCATTGCGGA GTTGAGTGTT GATGCAAAGC TGATTCGCCA 
    TCGTTTAGCT TTTTATAAGA GATGGGTTCA GTAGGGGTTG CGCCGTCTGG 
    GTTAAAGAAC AGCAGTAGCA CCAGCATGGG TGCTGAGAAG TTGCCTGATC 
    AGATGCATGA TCTGAAGATA AGGGACGATA AGGAAGTTGA AGCGACTATT 
    ATTAACGGCA AGGGAACAGA AACCGGCCAC ATAATTGTCA CAACTACTGG 
    TGGCAGAAAT GGTCAGCCGA AACAGACAGT TAGCTACATG GCTGAGCGTA 
    TTGTAGGGCA AGGTTCATTT GGGATTGTCT TCCAGGCAAA ATGTCTGGAG 
    ACAGGTGAGA CAGTTGCTAT CAAGAAGGTT CTTCAGGATA AGCGCTACAA 
    GAACCGTGAG CTTCAGACCA TGCGCCTTCT TGACCACCCA AATGTTGTAG 
    CTCTGAAGCA CTGTTTCTTC TCTACAACTG AGAAGGATGA ACTGTATCTA 
    AACTTGGTTC TTGAGTATGT GCCTGAAACT GTTCATCGTG TTGTGAAGCA 
    TTACAACAAG ATGAACCAGC GTATGCCACT TATCTATGTG AAGCTGTATA 
    TGTACCAGAT TTGTAGGGCA TTAGCTTACA TCCATAATAG CATCGGAGTT 
    TGCCACAGAG ATATCAAGCC ACAGAATCTT CTGGTAAACC CACATACCCA 
    TCAACTCAAG CTATGTGACT TTGGGAGTGC AAAAGTTCTG GTCAAGGGAG 
    AACCGAACAT ATCGTACATT TGCTCCCGAT ACTATAGGGC TCCGGAGCTC 
    ATATTTGGTG CCACCGAATA CACTACAGCT ATTGACATCT GGTCTGCTGG 
    ATGTGTTCTT GCTGAACTTA TGTTAGGGCA GCCTCTGTTT CCTGGTGAAA 
    GTGGTGTAGA CCAACTTGTG GAAATCATCA AGGTCCTTGG AACACCTACA 
    AGGGAGGAAA TTAAATGCAT GAATCCAAAC TATACCGAGT TCAAGTTTCC 
    ACAGATTAAA GCACACCCAT GGCACAAGGT ATTCCATAAA AGGTTGCCTC 
    CAGAAGCTGT TGATCTTGTC TCTAGGCTGC TCCAGTACTC ACCCAACCTA 
    AGATGCACCG CTGTGGAAGC ACTTGTTCAC CCATTCTTTG ATGAGCTTCG 
    AGACCCTAAT GCTCGCCTTC CGAATGGCCG CTTTTTGCCT CCTCTCTTCA 
    ACTTCAAGCC TCATGAACTG AAAGGAATCC CATCAGATAT TATGGCGAAA 
    TTGATCCCAG AACATGTGAA GAAGCAATGC TCCTATGCAG GAGTATGAGA 
    CAGCTTCCGC ACGACCCCCC TGGAAATTTC CATGACAAGT GCCCATTTCC 
    TCCCCCCTGG ACGACGATGG ATCGTCAGCA TATGCGTGCA TGATGGTTGG 
    TGAAGATGTG AAGTTACGTT GTTGTTGTAT GACCACCTTG TTGACCAGTG 
    TAGTTGAGTA GCAGTATGTT GCGATGGCGA AACTTTGACA TGTAACCGGT 
    GCACCCACAC CATCCCTCCC CTACTAACCC TCACCCACCT GAGAATTGAG 
    AATTCCCATA GCTGATGATC TGTAATATGT TCTAGAGCAG TTTAAGAATG 
    TATTTATTAT GGTGTAGTTG ATCC

    Gene models with high sequence identity

    1. AT5G26751.1 [+] show detail - shaggy-related kinase 11
      E-value: 0; Score: 743.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPfam Serine/threonine-protein kinase-like domain 1.1e-63
    HMMPanther GLYCOGEN SYNTHASE KINASE 3-RELATED (GSK3) (CM 7e-173
    HMMPanther CDC2, MAP KINASE-RELATED 7e-173
    superfamily Protein kinase-like domain 3.9e-85
    ProfileScan Protein kinase, catalytic domain 44.4
    HMMSmart Serine/threonine-protein kinase domain 1.1e-90
    HMMSmart Tyrosine-protein kinase, catalytic domain 3.2e-12
    Gene3D no description 1.1e-23
    Gene3D no description 4.6e-68

    See the detailed result >

    AT5G26751.1

    Model type
    Protein coding
    Short Description
    shaggy-related kinase 11
    Curator Summary
    encodes a SHAGGY-related kinase involved in meristem organization.
    Computational Description
    shaggy-related kinase 11 (SK 11); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: inflorescence meristem, whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR