S01051

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: S01051

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: S01051

Determination of introduced cDNA(s)

  • J023036D06 - Rice Full-length cDNAs - Original: J023036D06

    full reading [+] show sequence

    Nucleotide sequence: J023036D06 - full reading 
    GATAACTTTG CAGCAGGTTT AGTTCCTCGT TCTGATAAAC AAGCACACAT 
    GGTTTCCTCC ATGGTCCTTG CACAGTTGCT TCTCCTCTGC TTGTTATCGC 
    TTTCCTCGAG CAGTTCTTCC CAGATCAGCC CACTCAAGTG CCCCAATAGC 
    TCCGTTGATA TCCCATTTCC TTTCAAAATT GCCACCAACT CAAGCTTAAC 
    GTCAACTCCA GGCTTTGCGA TATCATGTCG TCAAACAGGC CCAATGATTT 
    TGCTCGGTGG TAACTACAGC GTCCTCAGCA TCTCCCTGCT CGAGGGATAC 
    GTACGTGTGA CTGGCCAGAC CGTATACTCC TCCCAGTGCC ATAACAATAG 
    CCAGGGAATC ATCGACCTCA CTGCCACAAA CTACATGTTC TCCCACACGC 
    AAAACAAGTT CACCGCCGTT GGCTGTGATG CCATGGCAAT GATAAGAAAC 
    AGCAGCGATG TTGTCGGTAA CACCAACAGC ACGGTGATGA GCAGATACAG 
    CGGGGGGTGC GTGTCGTTCT GCGCATCAAA TGGAAGCATC ATCAGCGGCG 
    AATGCTCCGG TGTGAGCTGC TGCCAGTCGT CAGTGCCCAA GGGGCTCAAC 
    AAGCTGGACT TGGAGTTCAC CAGCATACGG GACCAGCTGA TGCCACCCAC 
    GAGTGCCGTC GGTAGCGGCA GCACACGGTG CAGCAAGGCG TTCATCGCGG 
    AGCAGGACTC GTATGTGTTC TCTAGGCATG ACCTATACAA GGACTTGGGG 
    AATCTGCCGA TGGTGCTCGA CTGGTATATA CAGGGTGGCA ACTGCAAGGA 
    GGCAAGCCGC AGTCGTCAAA CCTACATGTG CAAGGAGAAC AGTTATTGCT 
    ATGAGGTGGA AGATGGAGCT GGATATCGCT GCAATTGCTC TGGAGGTTAC 
    ACTGGCAACC CGTACATTGG ATGTGTTGAT ATCGACGAAT GCAACGACGG 
    GAATAACTAT CCATGCACCC ACAAGTGCAT CAACATAGCT GGTGGTTACA 
    ATTGTACATG CCCAATGGGC ATGACAGGAG ATGGCAAGAA GCAAGGCATT 
    GGGTGTAAAA GAGATACAAC AATGTTGTCT ACTGTAGGTG GAAGCCTTGG 
    TTTGATGGCT GTTCTCATTG TTCTTGGCTT TTGGACTTAC TGGATAGTGA 
    AGAAGAGGAG GCTTGCAAAG CAGAAACAAC GATACTTCTT GCAAAATGGT 
    GGTTTGTTAT TGCAGCAGCA GATATTCACC CACCAAGCAC CTGCAAGGAT 
    ATTCACCACC AGTGAGCTCG AAGATGCAAC AAACAACTTC AGCGATGACC 
    GTATTGTTGG TCGAGGTGGA TATGGTACAG TGTATAAAGG GATACTATCT 
    GATCAAACCA TTGTGGCTAT CAAGAAGTCA AAGCTTGTGG ATCAGAGCCA 
    AATGGAGCAA TTTATCAACG AGTTGATAGT TCTTTCACAG ATTGATCACA 
    AAAATGTGGT CAAGATATTG GGCTGTTGTC TTGAGACTGA AGTGCCCTTA 
    CTGGTTTATG AATTTATATC GAATGGAGCT CTGTTCCACC AACTTCATAA 
    TACAAATTTG GTACCAATTT CATGGGAGCA TCGTCTTAGG ATAGCAACTG 
    AAACTGCATC AGCTCTTGCA AATCTTCACT TAGCAAGAAA GGTGCCAATC 
    ATCCATCGTG ATGTCGAGTC TGCCAATATA CTGATTGATG AGAACTACAC 
    CGCGAAGGTA TCAGACTTTG GCGCTTCAAG GCTAGTCCCT TCCAATCAGA 
    CACATGTAAC AACCTTAGTC CAAGGAACAT TAGGATACTT GGACCCTGAG 
    TACTTTTACA CAAGCCAACT AACTGACAAG AGCGATGTAT ATAGCTTCGG 
    TGTGGTTCTT GTTGAGCTAT TAACTAGACA AAAACCGATA TCTTATCATA 
    GGCAAGAGGA AGGGATAAAT CTAGCTTCAC ATTTCACGGC GCTTGCCCAG 
    CAGAACCGAC TACAGGAGAT TGTGGACTGC GTCGTGGTGA AGGAAGCTGG 
    AATGAGGCAT GTTAATGTGG TGTCGCATTT GATTCTGAAG TGTTTGAAGC 
    TTAAAGGGGA AGAGAGGCCA AGGATGGTAG AAGTAGCAAT TGAACTTGAA 
    GCGCTCAGAA GGTTAATGAA ACAACACCTG TCCCTGAAAA GTGAAAAGGC 
    TTTGAGAGAG CTTATGGAGC AGCAATCTGC TGAAGATTGC CAAGAGATGC 
    AGTTGCTTCA AGAGGAGAGC GGCCAGGAAA AAATGAGTAA CATTGAGCCG 
    CTGAAGTTGT ACCACAGGGA CAGTGCCTCG GATAAATGCA TGGAGAGCAG 
    TCCACTTCTA TCAATGGACC TCCCATGGTA GTGTACAATA TATCAACTGA 
    GGTGGTGTTT GAATCTCCTG AAAATGAAAA CAAAGATAAA AATTAAGTGT 
    TTTATGC

    Gene models with high sequence identity

    1. AT1G21240.1 [+] show detail - wall associated kinase 3
      E-value: 3e-130; Score: 462.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 2.9e-45
    HMMPfam EGF calcium-binding 1.1e-05
    HMMPanther WALL-ASSOCIATED PROTEIN KINASE 1.3e-173
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 1.3e-173
    HMMSmart EGF-like 18
    HMMSmart EGF-like calcium-binding 2.7e-08
    HMMSmart EGF-like 0.00081
    HMMSmart Serine/threonine-protein kinase domain 4.1e-33
    HMMSmart Tyrosine-protein kinase, catalytic domain 8.5e-25
    ProfileScan Protein kinase, catalytic domain 36.329
    ProfileScan EGF-like, type 3 7.792
    ProfileScan EGF-like, type 3 8.517
    superfamily Protein kinase-like domain 3.4e-76
    superfamily EGF/Laminin 2.6e-08
    superfamily EGF/Laminin 0.0013
    PatternScan EGF-type aspartate/asparagine hydroxylation site 0
    PatternScan Protein kinase, ATP binding site 0
    PatternScan EGF-like region, conserved site 0
    PatternScan EGF-like calcium-binding, conserved site 0
    Gene3D no description 0.00019
    Gene3D no description 2.3e-23
    Gene3D no description 3.4e-46

    See the detailed result >

    AT1G21240.1

    Model type
    Protein coding
    Short Description
    wall associated kinase 3
    Curator Summary
    encodes a wall-associated kinase
    Computational Description
    wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR