F00427

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F00427

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F00427

Determination of introduced cDNA(s)

  • RAFL05-14-L06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-14-L06 - Resource: pda07311

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-14-L06 - full reading 
    TATTGCGCGG CATCTCTCTC GTCTTCCTTT ACTCCGTCAA AACCATGTTT 
    CTAAGTCAGT GCCGGAGCTG TAAACCTTTG CTCGAGTCTC GTATACCTTT 
    GCTCCGCCTC TCTCTCTCTA AATGTCTCGA TCAGTCCTTC AAAACCACGG 
    CTAGTAGCGA ATACGGTAGT AAGATCCCTG ATGCTCTTCT GGGACATCGA 
    AGACTGGAAG ATCATAAGGC AAGCGTCTTC TGGGACGTGG AGGACTACAA 
    GATCCCTGAT GGTCTCAGTG CTGGTGAGGT TTCGAAGAAC ATCAATACGG 
    CTTTTGCGAA AATGGGATAT CCTGGTACGG TCTCAATCAA GGCTTATGCT 
    GATGAGACGA ATCAGAGGAT CCAGGATAAG GAGTTTCACT CCGCCGGTAT 
    CGAGCTCAAG CGCGTACCAG AAGGCTTGAA AGGAAAGGAT CATTCGAGAG 
    ATATAGCTGT TTTAACTGGC ATGGGGGTGT GGATTACTGT CAATCGTGAT 
    GTATCATCAT CGATAATGCT AATCTCAGAT AGCATCTACG GTTTTGCTGT 
    AGACGAGTTT AAGAAGGTGA ATCATTATGT TCTTTGGAAA AAACTATCAG 
    CTAAGGGCAA GCCTATCGCC CAGACCAGAA GATACTCTAA ACGTTGAGAC 
    CAGATATACT TGGTTCTCTC CATGCTAATT GTTGGGTTTT GAATAAGTCA 
    ATCACTAAGT CAAGTCTTAG CTTGTTTTTA GGAACTGATT GAGTTTTCTT 
    GTTTTGAGTT TGTTTCGTTT TTCAGTTCCG TTTCTTATTC CTTAGTTTTC 
    GTATTCACGT TGTAAGGCTC TTATAAAAGC CAATTTCAGT CTAATGAATT 
    AAACACGAAT CATTCAGC

    Gene models with high sequence identity

    1. AT3G62460.1 [+] show detail - Putative endonuclease or glycosyl hydrolase
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G62460.1

    Model type
    Protein coding
    Short Description
    Putative endonuclease or glycosyl hydrolase
    Computational Description
    Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62210.1); Has 141 Blast hits to 133 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR