F00438

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F00438

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F00438

Determination of introduced cDNA(s)

RAFL09-26-G02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-26-G02 - Resource: pda08090

full reading [+] show sequence

AATATAACAG AAAAATAAAT ATCTTGTCTG AATCAGAGAG AGAGCTCTCA 
ACAACCAAAG CTTTGGACTC TCAGGCCAGG AAGACTATGG GATTGGGCGG 
CGATCAATCC TTTGTTCCCG TCATGGATTC CGGCCAAGTC CGCCTCAAGG 
AGCTCGGCTA CAAGCAAGAG CTCAAGCGCG ATCTCTCGGT CTTCTCCAAT 
TTCGCCATCT CCTTCTCCAT CATATCGGTG CTCACTGGTA TCACCACCAC 
CTACAACACC GGCTTAAGAT TCGGCGGCAC TGTCACTCTG GTCTACGGAT 
GGTTCCTGGC CGGCTCCTTC ACAATGTGCG TTGGGTTATC TATGGCCGAG 
ATCTGCTCCT CTTACCCTAC CTCCGGTGGT CTCTACTACT GGAGTGCTAT 
GCTCGCTGGC CCTCGTTGGG CTCCTCTTGC CTCTTGGATG ACTGGCTGGT 
TCAACATCGT TGGTCAGTGG GCAGTGACGG CCAGCGTTGA CTTCTCTCTG 
GCACAGTTGA TTCAGGTGAT CGTCCTTCTC TCCACCGGCG GTAGAAACGG 
CGGCGGTTAT AAAGGATCAG ACTTTGTTGT GATTGGTATC CATGGTGGGA 
TCCTCTTCAT CCACGCTCTT CTCAACAGCC TCCCCATCTC CGTCTTGTCT 
TTCATTGGAC AGCTTGCTGC TCTTTGGAAT CTCCTCGGGG TTTTGGTGCT 
CATGATTCTG ATTCCTTTGG TTTCTACGGA AAGAGCAACC ACTAAGTTTG 
TCTTTACCAA TTTCAACACT GATAATGGCC TTGGCATCAC CAGCTACGCT 
TACATATTCG TTTTGGGACT CCTCATGAGC CAGTACACCA TTACAGGGTA 
TGATGCCTCT GCCCACATGA CAGAAGAGAC AGTCGACGCA GACAAGAACG 
GGCCCAGAGG AATAATCAGT GCAATTGGTA TATCAATTCT GTTTGGATGG 
GGTTATATAT TGGGCATAAG CTATGCCGTC ACAGACATAC CTTCTCTTCT 
GAGTGAGACC AACAACTCTG GTGGGTATGC CATTGCTGAG ATCTTCTACT 
TAGCTTTCAA GAATAGGTTT GGGAGCGGTA CTGGTGGAAT CGTGTGCTTA 
GGCATTGTTG CGGTTGCTGT GTTTTTCTGT GGCATGAGCT CTGTCACCAG 
CAATTCCAGG ATGGCGTATG CGTTTTCGAG AGATGGAGCG ATGCCAATGT 
CGCCGTTATG GCACAAAGTG AACAGCAGAG AGGTCCCCAT TAATGCGGTT 
TGGCTCTCTG CTCTCATATC ATTTTGTATG GCCCTCACCT CACTGGGGAG 
CATAGTGGCG TTCCAAGCAA TGGTGTCGAT CGCAACGATT GGACTGTACA 
TAGCATACGC AATCCCGATT ATATTGAGAG TGACGCTTGC GCGCAACACC 
TTCGTACCTG GACCATTCAG CCTGGGAAAA TACGGAATGG TAGTCGGGTG 
GGTGGCAGTC CTGTGGGTTG TAACCATATC AGTCCTCTTC TCCTTACCCG 
TGGCATATCC CATAACAGCA GAGACACTCA ACTACACTCC GGTGGCAGTT 
GCTGGTTTGG TGGCCATAAC CCTCTCATAT TGGCTTTTCA GTGCCCGCCA 
CTGGTTTACG GGTCCCATCT CCAACATTCT TAGCTGAAAC AACGTTTCAG 
GGGTTGATTT ATAGTAAAGC CATTGTTAGC TAGCTGATAT TTACCCTTTT 
ATACATTCAA CAAGCAACGA AAAAAAAAAA AAAAA

Gene models with high sequence identity

AT2G01170.1 [+] show detail - bidirectional amino acid transporter 1
E-value: 0; Score: 99.94

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amino acid permease domain	1.5e-25
HMMPanther	AMINO ACID PERMEASE-RELATED	5e-212
HMMPanther	Amino acid/polyamine transporter I	5e-212
HMMTigr	Amino acid permease subfamily	0
HMMPIR	Amino acid/polyamine transporter I	2.2e-34

See the detailed result >

AT2G01170.1

Model type: Protein coding
Short Description: bidirectional amino acid transporter 1
Curator Summary: Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description: bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link: InterPro Scan - TAIR