F01139

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F01139

Determination of introduced cDNA(s)

RAFL05-03-I04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-03-I04 - Resource: pda02429

full reading [+] show sequence

GAGTTTTCTT TATCCCCAAA AAACCCTAAA CTCTTCTTCT CGCCGACTTC 
TCTACTCCTT TCCAGAAACC AAGTTTCAGG TCATCGGTGA AATTTGTTGT 
GTTCCCGGCG ACTTCTACTT TTCACCTTTC TTCTCGGCGT CGTCTAATTT 
CTAGGGTTCC CCTGTATTTC ACCGTCAAGA GCAAATCCAA CATGTCGTCG 
CTGCGTAATG CTATTCCACG GCCTGCTCAT AAGGAGCGAT CTCAACCGGA 
AGCGAGGAAG AGGTTTGGCA TCCTCGAGAA GCATAAGGAT TATATTATCC 
GAGCTAATGC TTATCACAAA AAGCAGGAAA CTTTAAAGAT ACTTAGGCAG 
AAGGCTGCAT TCAAGAATCC AGATGAATTC AACTTTAAGA TGATTAATAG 
TAAAACAGTT GATGGACGTC ATAGACCAAA AGATGAGGTA AATAAATACT 
CTGCGGAAGA GCTTATGATT ATGAAGACTC AAGATATTGG ATATGTGTTC 
CAAAAATGGC AGAGTGAGAA AAACAAAATT GACAAGCTGA CTGCATCGCT 
GCAATGTACT GGGGATCAGT CAAGCCGTAG ACATGTTTAC TATGCAGAAG 
ACAGAGAGGA GGCTAGAGAA CTGGAGGTAC AAGGTAGAAG CAAAAGTGAT 
ATCTCTACAG TAGAGATTCC GAAAGATATT AAAAAGAAAA TGGATAGGTC 
CTATAGAGAC CTCGAGGGGC GGAAGAGCAG GGCTAAAGAT TTGGAGAAGT 
TATACACGGA TATGTCAATG CAGAAGGAGT TACAGAAAAA GGGTCGCAAA 
CGGAAGCTGC GTGATGACGA GCTGCTCAAT CCAAATGGTA AAGCGGTATA 
CAAATGGCGC GCCGATAGAA AACGCTGAAG AGAAAAGCTT TCATGGTTGT 
GTAGCTTGAC ATCATTTTTC TGATCTCTAT TAAAGTTTAT ATAGCAGGCA 
GTTTTATTAT AGTTTTTTTG ATCTCCAGAA CCTGCAGAAC TTTACATACA 
ATTTTGGATG GGACAATATC TGTTTACTTT AAGCTCTTTG TTGCGTATCT 
GGAAAAGTTT TACTAATGTG ATTGACGAAA TATAAAC

Gene models with high sequence identity

AT3G60360.1 [+] show detail - embryo sac development arrest 14
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Small-subunit processome, Utp11	8.2e-79
HMMPfam	Small-subunit processome, Utp11	1.7e-60
HMMPIR	Small-subunit processome, Utp11	1.9e-129

See the detailed result >

AT3G60360.1

Model type: Protein coding
Short Description: embryo sac development arrest 14
Computational Description: EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link: InterPro Scan - TAIR