F02222

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F02222

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F02222

Determination of introduced cDNA(s)

  • RAFL09-64-O14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-64-O14 - Resource: pda08605

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-64-O14 - full reading
    GTCAAATCAT TTTCGACGAC TGTTATTAAT AATTAATTCG TTAATGACGC 
    ACCGTTAGTC AACTCCGCTT CGTATTAATT ACTCCTCCGA TCTCTTTCTT
    ATTCTTCTCC GGCGACACTT CCCTTGCTTC TCCCTCTTAG GACTCTCTCT
    ACGAATCTGT AAGCTTCAAA TTCTTACGCC ACACTCCGAG ATTCGCTTCT
    GATTATTGTA TGAATTTTTG AGCTCCAAGG ATCCACTGCC ATGTATTTAT
    GCTGCTAAAG CTTGAAGGCA GTAGTGGAAT CACCATTAAG TTCTTTGCTT
    TGTAATTTAG CTTGATTTGA GAATAAACAA ATGGGAAAAG CATCAGGCTT
    GCTTCTGTTT CTCTTGGGTT TTGGGTTCTT TGTTGTCACA TATAATCTTC
    TGACACTTAT AGTTCACAAT AGATCTGGTG TGAGTAATTC AGATGGAAGT
    CCACTTCTGG ATCCTGTTGT TCAGATGCCT CTAAATATTA GGAAAGCCAA
    GAGTTCTCCA GCACCTTTTC ATGTTGCCTT AACAGCTACA GATGCACCTT
    ATAATAAGTG GCAGTGTCGT ATTATGTATT ATTGGTATAA GCAGAAGAAA
    GCTCTTCCTG GTTCTGATAT GGGTGGCTTC ACCCGTATTT TGCATTCCGG
    TAATTCTGAT AACTTGATGG ATGAAATACC CACATTTGTG GTTGATCCTC
    TTCCTCCAGG TCTTGATCGG GGGTATGTTG TCTTGAATAG ACCATGGGCA
    TTCGTGCAAT GGCTTGAAAG AGCTACCATC AAGGAAGACT ATGTGCTCAT
    GGCAGAGCCT GATCATGTAT TTGTTAATCC CCTTCCCAAT TTGGCTGTTG
    GAGGATTCCC AGCCGCTTTT CCGTTTTTCT ATATTACTCC TGAAAAGTAT
    GAAAACATAG TCAGAAAGTA TTATCCAGCG GAGATGGGGC CAGTAACAAA
    TATCGACCCC ATTGGCAACT CTCCTGTTAT CATAAGCAAG GAATCACTTG
    AAAAGATTGC TCCTACATGG ATGAATGTCT CGCTGACAAT GAAAAACGAT
    CCAGAAACTG ATAAGGCATT TGGATGGGTG CTGGAAATGT ACGGTTACGC
    AATTGCATCT GCTATACATG GGGTGCGTCA CATACTTCGG AAGGATTTCA
    TGCTTCAGCC TCCGTGGGAT TTGTCTACCA AGGGGAAGTT TATCATTCAT
    TACACTTATG GATGCGACTA CAACATGAAG GGGGAGCTGA CATATGGCAA
    AATAGGAGAG TGGCGATTCG ATAAGAGATC ACATTTGCGG GGTCCTCCTC
    CAAGGAACAT GTCCTTGCCG CCTCCCGGTG TTCCCGAAAG TGTGGTGACA
    CTTGTGAAGA TGGTGAATGA AGCTACTGCG ACTATCCCTA ATTGGGACAC
    TCTCTAACTC ACATCCACAC ACAAAACACA AACCATAGGG ACAAATCCAT
    ACAGCAACAA TATTTTGCCT AATTTTTTTT TCCTTCTCCC TTTACTTCCC
    TTCTTGTCTG TTTTTTCTTG TAATGGTTAA ATTATGAACT TGAGTAGTAA
    ATTACAAAAT TATTTGTTTG ACT

    Gene models with high sequence identity

    1. AT5G13500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G13500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR