F03945

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F03945

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F03945

Determination of introduced cDNA(s)

  • RAFL09-15-A05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-15-A05 - Resource: pda01876

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-15-A05 - full reading 
    TGACCATCAT TCACACACAC TCATGGCTTC TTCTTCTTCT TCTTCTTCCT 
    CCATCACAAT CATCACCACC TTCCTCTTCC TTCTCCTCCA CACAACCGCC 
    AAAAAAACCT ACATCATCCG CGTCAATCAC TCCGATAAAC CGGAATCATT 
    CCTCACTCAC CACGATTGGT ACACATCTCA ACTCAATTCA GAATCATCTC 
    TTCTCTACAC TTACACAACC TCCTTCCATG GCTTCTCCGC TTACCTCGAC 
    TCCACCGAAG CCGATTCTCT CCTCTCCTCC TCAAACTCAA TCCTCGATAT 
    CTTCGAAGAT CCTCTCTACA CACTTCACAC TACGCGTACT CCTGAGTTTC 
    TCGGTCTCAA TTCCGAATTC GGTGTTCACG ATCTCGGTTC TTCTTCTAAC 
    GGCGTTATCA TCGGAGTTTT AGATACTGGC GTTTGGCCTG AATCTAGAAG 
    CTTCGATGAT ACTGATATGC CTGAGATTCC TTCTAAATGG AAAGGAGAAT 
    GTGAATCTGG TTCCGATTTC GATTCCAAGT TGTGTAACAA GAAGCTTATC 
    GGAGCTAGAA GCTTCTCCAA AGGATTTCAA ATGGCTTCTG GTGGTGGTTT 
    TTCGAGTAAG CGTGAATCTG TTTCTCCTCG TGATGTTGAC GGACATGGAA 
    CACATACTTC AACTACCGCC GCGGGATCCG CCGTTAGAAA CGCTAGCTTC 
    CTCGGTTACG CCGCCGGTAC GGCCAGAGGT ATGGCCACTC GTGCTCGTGT 
    TGCTACTTAT AAAGTTTGTT GGAGTACTGG TTGTTTTGGA TCTGATATAC 
    TAGCTGCTAT GGATCGAGCT ATACTTGATG GTGTTGATGT GCTTTCGTTA 
    TCTCTTGGTG GTGGTTCTGC TCCGTATTAT CGCGATACGA TTGCGATTGG 
    AGCGTTTTCG GCTATGGAGA GAGGTGTTTT TGTGTCTTGT TCTGCTGGTA 
    ATAGTGGTCC TACTAGAGCT TCTGTTGCCA ATGTTGCTCC TTGGGTTATG 
    ACTGTTGGTG CTGGTACTTT AGATAGAGAT TTTCCGGCTT TTGCGAATCT 
    CGGTAACGGG AAACGACTTA CCGGTGTTTC GCTGTATAGC GGTGTAGGAA 
    TGGGGACGAA GCCGCTTGAA TTGGTTTATA ATAAAGGGAA TAGTAGTTCG 
    AGTAATCTTT GTTTACCTGG TTCGCTTGAT TCGAGTATTG TTCGTGGGAA 
    GATTGTTGTT TGTGATAGAG GTGTTAATGC TAGAGTTGAG AAAGGAGCTG 
    TGGTTAGAGA TGCTGGTGGT TTAGGGATGA TAATGGCGAA TACTGCTGCG 
    AGTGGAGAGG AGCTTGTGGC GGATAGTCAT TTGCTTCCCG CGATCGCTGT 
    AGGGAAGAAG ACTGGTGATT TACTTAGGGA GTATGTTAAG TCAGATTCTA 
    AACCAACCGC TCTTCTTGTT TTTAAAGGAA CGGTTCTTGA CGTTAAGCCG 
    TCTCCTGTGG TTGCTGCTTT TAGCTCGAGA GGTCCTAATA CTGTTACTCC 
    TGAAATCTTG AAGCCTGATG TTATTGGTCC TGGAGTTAAT ATTTTGGCTG 
    GTTGGTCTGA CGCTATTGGT CCTACTGGTC TTGACAAGGA CTCTAGGAGG 
    ACTCAGTTCA ACATCATGTC AGGTACGTCA ATGTCATGCC CACACATCAG 
    TGGTTTAGCG GGTCTTTTGA AAGCAGCTCA CCCTGAGTGG AGTCCGAGTG 
    CTATCAAATC AGCTCTCATG ACTACAGCTT ACGTTCTTGA CAACACCAAC 
    GCTCCTCTCC ATGATGCTGC AGACAACAGC CTATCTAACC CATATGCTCA 
    CGGCTCGGGC CATGTAGATC CCCAAAAGGC TCTCTCACCA GGTCTTGTCT 
    ACGACATCTC AACCGAGGAA TACATCAGGT TTTTGTGCTC TCTAGACTAC 
    ACAGTCGATC ACATTGTTGC GATTGTGAAG CGACCTAGCG TTAACTGCTC 
    GAAGAAGTTC TCAGATCCTG GTCAGCTCAA CTACCCAAGT TTCTCGGTTT 
    TGTTTGGGGG TAAAAGAGTT GTGCGGTACA CTCGGGAAGT AACAAATGTT 
    GGTGCAGCAA GCTCGGTTTA CAAAGTGACG GTTAATGGAG CTCCTAGTGT 
    CGGAATCTCT GTTAAACCAT CGAAACTTTC GTTTAAAAGC GTGGGAGAGA 
    AGAAGAGGTA CACAGTCACG TTTGTTAGCA AGAAAGGAGT GAGTATGACG 
    AACAAGGCTG AGTTTGGTTC CATCACTTGG AGCAATCCGC AGCACGAAGT 
    GAGAAGTCCC GTTGCATTCT CTTGGAACCG GTTTTGATAA AAAAACTAAC 
    ATCCCTAGTG ATGATGTTTT CTATTTAAGT TATCTTGATT GGGTTTAGGC 
    TAAACCAAAG CCCATCATGA GCCATAAGTA GTGGGAAGTG TTCTTGTGTG 
    GTTTGGTTTG AGTCATTGAG TGTGTAGGTG AAAGCATCCC AAAAAAAGTT 
    AGGGATGATA AAAGAAAATG TTGTCAGGAA AAGAACGTTG ATGTCGTCAT 
    ATGTAGTGCT TCAAGTTTCT TCAAGAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT2G05920.1 [+] show detail - Subtilase family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBTILISIN-LIKE PROTEASE (PLANT) 0
    HMMPanther Peptidase S8, subtilisin-related 0
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 7.3e-13
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 7.3e-13
    FPrintScan Peptidase S8/S53, subtilisin/kexin/sedolisin 7.3e-13
    HMMPfam Peptidase S8/S53, subtilisin/kexin/sedolisin 1.4e-29
    HMMPfam Protease-associated PA 2.9e-17
    HMMPfam Proteinase inhibitor I9, subtilisin propeptide 5.7e-12
    superfamily Peptidase S8/S53, subtilisin/kexin/sedolisin 6e-77
    superfamily Transferrin receptor ectodomain, apical domai 6.5e-08
    superfamily Proteinase inhibitor, propeptide 8.3e-06
    Gene3D Peptidase S8/S53, subtilisin/kexin/sedolisin 5.9e-72
    PatternScan Peptidase S8/S53, subtilisin, active site 0

    See the detailed result >

    AT2G05920.1

    Model type
    Protein coding
    Short Description
    Subtilase family protein
    Computational Description
    Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 7371 Blast hits to 6472 proteins in 1023 species: Archae - 222; Bacteria - 3849; Metazoa - 147; Fungi - 727; Plants - 1890; Viruses - 0; Other Eukaryotes - 536 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR