F04047

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F04047

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F04047

Determination of introduced cDNA(s)

  • RAFL06-80-H11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-80-H11 - Resource: pda03781

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-80-H11 - full reading 
    ACTGAGTCGC CATGGAACTG GTGTCTCTTC CGATCCACCA CCGTACGGCG 
    CCGCCGAATT TTCCACCACT CGAAACTGGA AATCCAGTAG CTAACCGGAT 
    TGGACAAGCT CTACGATTCA GCAATGTTAG AATGAGAAAG CCCGCGTATT 
    TAGGAACGAT CTTATCTGAG AAATCAAGAG CAAGAACATT AACGACGGCG 
    GAAGCAGTTT CCGGAAGTGG AGTTTCGCTT CCGCCGCTGG ATTTGACTGA 
    GGATAATATC CATTTGGTAC TATCCGAAGC TCGTATCGAG CTAGCACAAC 
    TCTTCGACTC ATCGGTTGGG ATAACAGGAC AAGTAGAGTT AGTGGAACTA 
    GACGGACCAT TCGTTACGAT AAGTTTAAGA GGCAAGTTTT GGCATACGCG 
    TGCAATGGTT CTAGCTCGAC TTGGGAACTA CTTAAAACAG AGGATCCCTG 
    AGATTTTGGA GGTTAATATT GAAGATGAAA AGCAACTCGA TGATAGTCCT 
    GCAAATTTCT AAATCTTCCA TTTTGTTCAT TTGGAAAATA TTTATTGATC 
    TTTCTTGCTG CTTAATGTGA CTTTGAAGTT TGATGATGCT TATGAGTTGT 
    TAAAACTCTG TTGAGTATCT AAAATCGATG CTTTGTAGCA AAGTATACAT 
    CGTTTCTAAA AGCCCAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT2G33180.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G33180.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR