F05439

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F05439

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F05439

Determination of introduced cDNA(s)

  • RAFL09-49-F14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-49-F14 - Resource: pda06417

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-49-F14 - full reading
    GAAGGGAAAA AACCAAAAAA ATATATCTTA CAAACAAAAT AAGGGTGCAA 
    AACGTATAAG AAAATAAAAG AATGGGATCA AAGTGGAATA AAAGAATATT
    AGGGCGTCGG TGACGTGAAG CTTCGCTGCT GGGAGAAAAA AGCTCACATG
    CGTATTATCT CAGTCTCAGC TATATTTAGA ACAACAACAC ATGTCTGAAC
    ACATTACAGT TCCTATATCT GTTTCGAATT CAAATCTCCT GTCCTTTTTT
    CATATATAAT AATTCATCAT AAATATTTAT TGATTTGATT CTATCTCTTA
    TATATATTTT CGATCTCTCC TGAAAAGAGA AAAAAGTTGG AAACTTCGAC
    GAATGTGTTT ATAAATCTTT TTATTTTCTA TCTGTCTTGA TTTAGTTTTA
    TCTTTTTTGG AATCGGTCTG AAGTTGGACA AAAGAATCCG CCATTTTCTC
    CTCGGTCTCT CTGCTCTTCT CTTCAGTATC GGATCTGGGT CTCCTTCGCT
    TTCGTTTCAA GATTATTTTG GGAGACGAGG AGGCGTTAGC TGTAATTCAT
    TGTATACTTG CTTTGGCTAT TAAAGCCGTC ACACAAAAAA AGTAAAAGCA
    ACACACACAC ATAAATAGAC ACACTTTTTT ACGTATATGT GTGTCTTCTT
    TCGTCTCTGT TGGGAATAGA TCTTGTCCTA AGAGATCACT TCGAGTCTGA
    TCTAAAGTGA GAAACTTTGG TTCTTGTTTT GGTTTTTGGA ATCTTGTCTA
    ATCTGGGGAG ATAATGGGAA TGAGTCTCGA TTTCGATGTT GATCTTGAGA
    AAGGAATCAT AGATTGCGAC AATGTTTATA CAAAATCACC GGAGAAGCCG
    ATGTCTCCTG ATAACAAACC GGTAATAACC GGAGAAGAAA GTGTTGGTTC
    GTTAGAGAAT GATACAAGTC CGGTTCAATG TGGAATCAAT AAACCGGGAT
    GGGGGAGAAG CGATCGGAAG GAGAAACGGA AGAAATCTGC GTCGAAGCCT
    CCTCGACCGC CGCGTGGACC GTCGCTAGAC GCGGCGGATC AGAAACTTAT
    TAGAGAGATC GCTGAATTGG CGATGTTGAA ACGCGCGAGA ATCGAACGTA
    TGAGAGCTTT GAAGAAATCA AGAGCGGCTA AAGCTGCGTC TGCCGCTTCT
    TCTTTAGGCA ATGTATTGGC CACTCTTTTC ACCGCTATTT TCTTCTTTGT
    CCTCGTTTTC CAAGGATTGT CACCGAGAGC AGCCGGTAGC TCCGGGAAAT
    CTCACTTAGT AGTCGCCGGC AAAGCCAATG GTGGTTTTGT TTCGGTTCAA
    TATGCGGGAA ATCCGTCGGC GAGCGAACCG GATGGAGGTT ATACCGGACC
    AGTTTTAGCA CAGAGACCAA ATTTACTAAA ACCGGTGTCC GGTTTGGAGA
    ATGAAAAGAA GAGTTCACAG TGAAAGCGTA ACGAAATGGT TAAGAATTGG
    ACAGTTCCAT ACTGGTTTGC TCAAACCATT TATCGGTTTA GATTGTCGGT
    GAGACATGTA CCGATAAACT TTTTGGGAAA ATCGGCTGCT TTCTCTGCGG
    CTGTGAAACG ATAATATTAT CCGATGTGGG TAAGAAAGTA GTTTTGTGTC
    AGTTTTTTCT TGAATAAACT GAGAGAAGTT TACAAATAAT AAAAATCAGT
    GTTATATTAT CC

    Gene models with high sequence identity

    1. AT3G17120.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G17120.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR