F06009

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06009

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06009

Determination of introduced cDNA(s)

  • RAFL09-69-J01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-69-J01 - Resource: pda06663

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-69-J01 - full reading 
    GTCTGGTTTG AAATCAGAAT TTTAAAAAAA TTGAACAAAT TAAAAAGAAA 
    AGAAAAATCT CGTTGTTGAG AAGAAGAACA TCTTCCCCAC TCTCTCCCTT 
    CTTCTTCTTC TTCTTCAACT CAAAAAACTT CTCTCTCTCT CTCTCTCTCT 
    CTCTGAATCA ATTAAAAAAC GGTTTTGGGT TCTTGTCCTC TGTTCTCTAG 
    TGGCTTCTAT TATTCTCATT GGTGGCTGTT CCAGCTCTCT TAAGGTCTCC 
    TTAGTGTGAT CTCAGATCTG ATTGGTCCGA TTCTATTTTT CTTTTTATTT 
    TGGAGATAAT TTGTTGTTGT GCAAGTTCAG ACACGAGACC CAGAAAATTT 
    CAATCTCAGC TTTCGTCAAT GTTGACCCAC GACAGAGATG AAGAACTCTC 
    TCTGTTCCTT GAGATGCGTC GTCGCGAGAA AGAACATAGA GCAGATTCTC 
    TTTTAACAGG ATCTGATAAT GTTAGTATCA ACGCAACGTT GACGGCTGCG 
    GCGGCGGCTG CTCTCTCTGG TGTCTCCGAA ACGGCGTCGT CTCAACGTTA 
    TCCTCTCAGG AGAACCGCTG CTGAGAACTT TCTATATTCG GAGAATGAGA 
    AGTCTGATTA CGATTGGCTG CTAACACCTC CAGGCACGCC ACAGTTCGAG 
    AAAGAGTCAC ATAGAAGTGT AATGAATCAG CACGATGCTC CCAATTCCCG 
    ACCCACGGTT CTTAAATCTC GGCTAGGGAA CTGTCGTGAA GATATCGTCT 
    CAGGGAACAA TAATAAGCCC CAAACAAGCT CTTCCTCTGT AGCTGGACTC 
    AGAAGACCAT CTTCTTCTGG TAGCTCAAGG TCAACGAGCA GACCTGCCAC 
    ACCAACCAGA AGGTCTACAA CTCCAACCAC CTCCACATCA AGGCCCGTGA 
    CCACCAGAGC TTCAAATTCT AGATCCTCAA CACCCACCTC ACGTGCCACC 
    TTAACTGCTG CACGTGCTAC TACATCTACA GCAGCTCCAC GAACCACTAC 
    TACTTCAAGC GGTTCAGCGA GATCAGCTAC TCCAACTCGG TCTAATCCTC 
    GACCGTCTTC TGCATCTTCA AAAAAGCCAG TGTCAAGGCC AGCCACACCA 
    ACCCGCAGGC CTTCAACCCC GACCGGTCCA TCAATAGTTT CGAGTAAGGC 
    TCCGTCGCGA GGGACTTCTC CTTCTCCTAC TGTGAATTCG TTGAGTAAGG 
    CTCCGTCCCG AGGGACTTCT CCTTCTCCTA CTTTGAATTC GTCGAGGCCG 
    TGGAAACCAC CAGAGATGCC TGGTTTCTCT TTAGAAGCTC CACCGAATCT 
    GAGGACGACT TTAGCAGACA GACCGGTCTC AGCTTCAAGA GGCAGACCTG 
    GAGTAGCCTC AGCACCAGGT TCAAGATCTG GTTCCATAGA ACGCGGAGGT 
    GGCCCCACCA GCGGCGGCAG CGGAAATGCA AGAAGGCAAT CTTGTTCGCC 
    GTCCAGAGGT CGGGCTCCTA TCGGGAACAC CAACGGGAGT CTCACTGGTG 
    TGCGTGGGCG AGCAAAGGCA AGCAACGGCG GAAGTGGCTG TGATAACTTG 
    AGCCCAGTGG CTATGGGTAA TAAAATGGTT GAGAGAGTGG TGAACATGAG 
    GAAACTAGGT CCACCGCGGC TAACCGAGAA TGGTGGTCGA GGATCGGGGA 
    AATCTAGCTC AGCTTTTAAC AGCCTTGGAT ATGGTAGAAA CCTCTCCAAA 
    AGCTCAATCG ATATGGCCAT AAGACATATG GATATAAGAC GAGGCATGAC 
    TGGAAACCTC CGGCCGCTTG TGACAAAAGT TCCGGCATCA TCAATGTACA 
    GTGTGAGAAG TCGGCCGGGT AGTGTCTCAA GCTCTCCGGT GGCCACGAGC 
    AGCACTGTGA GCTCATCTGA CCCGAGTGTT GACAACATCA ACATTCTGTG 
    CTTAGACGGA AACGAAGCCG AAAATGATGA TCTTCTTAGT GAAAGAAGCT 
    ATGCTGCTTC TCCGCGGAAC CAGTACCCCA AGTTCACATC TTGACCCATA 
    TTATTATGTA ATCTGTGTTC TTGTTTTTTG TTCTCACGCT TCGAAGCAAC 
    TTGTTTCTAA GTGATCAACC GTATAATCTA TAAACCTCAG GCATCAAATG 
    TCTTTTTTCC TTCATG

    Gene models with high sequence identity

    1. AT3G09000.1 [+] show detail - proline-rich family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G09000.1

    Model type
    Protein coding
    Short Description
    proline-rich family protein
    Computational Description
    proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR